Difference between revisions of "Charged-PRO-tRNAs"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_18824 == * left end position: ** 344 * transcription direction: ** POSITIVE * right end position: ** 2680 * centisome position: ** 12.40981...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14274 RXN-14274] == * direction: ** REVERSIBLE * common name: ** decanoyl-CoA C-acyltransferase...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_18824 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14274 RXN-14274] ==
−
* left end position:
+
* direction:
−
** 344
+
** REVERSIBLE
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** decanoyl-CoA C-acyltransferase
−
* right end position:
+
** acetyl-_c-acetyltransferase
−
** 2680
+
** 3-ketoacyl-_thiolase
−
* centisome position:
+
** thiolase
−
** 12.409812   
+
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[RXN-15556]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[CPD-10267]][c] '''+''' 1 [[ACETYL-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD0-2105]][c]
−
***ec-number
+
* With common name(s):
−
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
** 1 decanoyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''<=>''' 1 coenzyme A[c] '''+''' 1 3-oxododecanoyl-CoA[c]
−
** in-silico_annotation
+
 
−
***ec-number
+
== Genes associated with this reaction  ==
−
== Pathways associated ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[PWY-7511]]
+
* [[Tiso_gene_15327]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_17451]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3856]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_3855]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_10116]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_16181]]
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways ==
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 +
*** [[athaliana]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=344}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31185 31185]
−
{{#set: right end position=2680}}
+
* LIGAND-RXN:
−
{{#set: centisome position=12.409812    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04742 R04742]
−
{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: pathway associated=PWY-7511}}
+
{{#set: common name=decanoyl-CoA C-acyltransferase}}
 +
{{#set: common name=acetyl-_c-acetyltransferase}}
 +
{{#set: common name=3-ketoacyl-_thiolase}}
 +
{{#set: common name=thiolase}}
 +
{{#set: ec number=EC-2.3.1.16}}
 +
{{#set: gene associated=Tiso_gene_15327|Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_3855|Tiso_gene_10116|Tiso_gene_16181}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus|athaliana}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:11, 10 January 2018

Reaction RXN-14274

  • direction:
    • REVERSIBLE
  • common name:
    • decanoyl-CoA C-acyltransferase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
    • thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 decanoyl-CoA[c] + 1 acetyl-CoA[c] <=> 1 coenzyme A[c] + 1 3-oxododecanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links








Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Charged-PRO-tRNAs&oldid=16583"