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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == | + | == Gene Tiso_gene_6098 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 8142 |
| − | * common name: | + | * transcription direction: |
| − | ** glutamate-5-semialdehyde_dehydrogenase | + | ** POSITIVE |
| − | * ec number: | + | * right end position: |
| − | ** [http://enzyme.expasy.org/EC/1.2.1.41 EC-1.2.1.41] | + | ** 12262 |
| | + | * centisome position: |
| | + | ** 64.73722 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * [[3.4.11.5-RXN]] |
| − | ** 1 [[NADPH]][c] '''+''' 1 [[L-GLUTAMATE-5-P]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[NADP]][c]
| + | ** in-silico_annotation |
| − | * With common name(s):
| + | ***automated-name-match |
| − | ** 1 NADPH[c] '''+''' 1 γ-L-glutamyl 5-phosphate[c] '''+''' 1 H+[c] '''=>''' 1 phosphate[c] '''+''' 1 L-glutamate-5-semialdehyde[c] '''+''' 1 NADP+[c]
| + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_16634]] | + | |
| − | ** [[pantograph]]-[[athaliana]]
| + | |
| − | ** [[pantograph]]-[[synechocystis]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | ** [[pantograph]]-[[creinhardtii]]
| + | |
| − | * [[Tiso_gene_16258]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
| + | |
| − | ** '''6''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
| + | |
| − | ** '''4''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | * [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
| + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway | + | |
| − | * [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
| + | |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway | + | |
| − | * [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY] | + | |
| − | ** '''8''' reactions found over '''8''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[creinhardtii]]
| + | |
| − | *** [[synechocystis]]
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | *** [[athaliana]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: left end position=8142}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19541 19541]
| + | {{#set: transcription direction=POSITIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: right end position=12262}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313]
| + | {{#set: centisome position=64.73722 }} |
| − | * UNIPROT:
| + | {{#set: reaction associated=3.4.11.5-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/Q9JUK8 Q9JUK8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P45121 P45121]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P53000 P53000]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P07004 P07004]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P17857 P17857]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P45638 P45638]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P54885 P54885]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O04226 O04226]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=glutamate-5-semialdehyde_dehydrogenase}} | + | |
| − | {{#set: ec number=EC-1.2.1.41}} | + | |
| − | {{#set: gene associated=Tiso_gene_16634|Tiso_gene_16258}} | + | |
| − | {{#set: in pathway=PWY-6922|PROSYN-PWY|PWY-3341|ARGININE-SYN4-PWY|CITRULBIO-PWY}} | + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=in-silico_annotation}}
| + | |
