Difference between revisions of "PGPPHOSPHA-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17367 CPD-17367] == * smiles: ** CCCCCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] == * direction: ** REVERSIBLE *...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17367 CPD-17367] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-DEHYDROQUINATE-DEHYDRATASE-RXN 3-DEHYDROQUINATE-DEHYDRATASE-RXN] ==
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* smiles:
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* direction:
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** CCCCCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** REVERSIBLE
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* inchi key:
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** InChIKey=JHXLRLHTJYMVBK-DHDHVEHBSA-J
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* common name:
 
* common name:
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** (3R)-hydroxy-adrenoyl-CoA
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** pentafunctional_protein
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* molecular weight:
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* ec number:
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** 1094.012   
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** [http://enzyme.expasy.org/EC/4.2.1.10 EC-4.2.1.10]
 
* Synonym(s):
 
* Synonym(s):
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** (3R)-hydroxy-(7Z,10Z,13Z,16Z)-docosa-7,10,13,16-tetraenoyl-CoA
 
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** (3R)--hydroxy-(7Z,10Z,13Z,16Z)-docosatetraenoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-16112]]
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** 1 [[DEHYDROQUINATE]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[3-DEHYDRO-SHIKIMATE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 3-dehydroquinate[c] '''<=>''' 1 H2O[c] '''+''' 1 3-dehydroshikimate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_8720]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5753]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_5752]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5619]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14718]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-6707]], gallate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6707 PWY-6707]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6416]], quinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6416 PWY-6416]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[QUINATEDEG-PWY]], quinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=QUINATEDEG-PWY QUINATEDEG-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=72193769 72193769]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21096 21096]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=76415 76415]
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** [http://www.genome.jp/dbget-bin/www_bget?R03084 R03084]
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{{#set: smiles=CCCCCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=JHXLRLHTJYMVBK-DHDHVEHBSA-J}}
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** [http://www.uniprot.org/uniprot/P05195 P05195]
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{{#set: common name=(3R)-hydroxy-adrenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P46380 P46380]
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{{#set: molecular weight=1094.012    }}
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** [http://www.uniprot.org/uniprot/Q9CF39 Q9CF39]
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{{#set: common name=(3R)-hydroxy-(7Z,10Z,13Z,16Z)-docosa-7,10,13,16-tetraenoyl-CoA|(3R)--hydroxy-(7Z,10Z,13Z,16Z)-docosatetraenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P07547 P07547]
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{{#set: produced by=RXN-16112}}
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** [http://www.uniprot.org/uniprot/P08566 P08566]
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** [http://www.uniprot.org/uniprot/P43878 P43878]
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** [http://www.uniprot.org/uniprot/P05194 P05194]
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** [http://www.uniprot.org/uniprot/Q58849 Q58849]
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** [http://www.uniprot.org/uniprot/P0A4Z6 P0A4Z6]
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** [http://www.uniprot.org/uniprot/Q9PJ53 Q9PJ53]
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** [http://www.uniprot.org/uniprot/P05147 P05147]
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** [http://www.uniprot.org/uniprot/P24670 P24670]
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** [http://www.uniprot.org/uniprot/P35146 P35146]
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** [http://www.uniprot.org/uniprot/Q42947 Q42947]
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** [http://www.uniprot.org/uniprot/Q48255 Q48255]
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** [http://www.uniprot.org/uniprot/P73367 P73367]
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** [http://www.uniprot.org/uniprot/O65917 O65917]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=pentafunctional_protein}}
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{{#set: ec number=EC-4.2.1.10}}
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{{#set: gene associated=Tiso_gene_8720|Tiso_gene_5753|Tiso_gene_5752|Tiso_gene_5619|Tiso_gene_14718}}
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{{#set: in pathway=PWY-6707|PWY-6416|QUINATEDEG-PWY|PWY-6163}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}

Revision as of 18:13, 10 January 2018

Reaction 3-DEHYDROQUINATE-DEHYDRATASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • pentafunctional_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6707, gallate biosynthesis: PWY-6707
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6416, quinate degradation II: PWY-6416
    • 2 reactions found over 3 reactions in the full pathway
  • QUINATEDEG-PWY, quinate degradation I: QUINATEDEG-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PGPPHOSPHA-RXN&oldid=16739"