Difference between revisions of "Tiso gene 5703"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN DETHIOBIOTIN] == * smiles: ** CC1(NC(=O)NC1CCCCCC(=O)[O-]) * inchi key: ** InChIKe...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN DETHIOBIOTIN] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC1(NC(=O)NC1CCCCCC(=O)[O-])
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/6.3.3.1 EC-6.3.3.1]
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** InChIKey=AUTOLBMXDDTRRT-UHFFFAOYSA-M
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* common name:
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** dethiobiotin
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* molecular weight:
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** 213.256   
 
* Synonym(s):
 
* Synonym(s):
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** desthiobiotin
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** DTB
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[2.8.1.6-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
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* [[RXN-17472]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 ATP[c] '''+''' 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c] '''=>''' 1 phosphate[c] '''+''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
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* [[DETHIOBIOTIN-SYN-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_1369]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[synechocystis]]
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== Pathways  ==
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* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 533-48-2
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23032 23032]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244917 25244917]
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** [http://www.genome.jp/dbget-bin/www_bget?R04208 R04208]
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* HMDB : HMDB03581
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P07244 P07244]
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** [http://www.genome.jp/dbget-bin/www_bget?C01909 C01909]
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** [http://www.uniprot.org/uniprot/P12043 P12043]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P21872 P21872]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57861 57861]
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** [http://www.uniprot.org/uniprot/P08178 P08178]
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* BIGG : dtbt
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** [http://www.uniprot.org/uniprot/P00967 P00967]
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{{#set: smiles=CC1(NC(=O)NC1CCCCCC(=O)[O-])}}
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** [http://www.uniprot.org/uniprot/P16340 P16340]
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{{#set: inchi key=InChIKey=AUTOLBMXDDTRRT-UHFFFAOYSA-M}}
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** [http://www.uniprot.org/uniprot/P22102 P22102]
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{{#set: common name=dethiobiotin}}
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** [http://www.uniprot.org/uniprot/Q57656 Q57656]
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{{#set: molecular weight=213.256    }}
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** [http://www.uniprot.org/uniprot/O66968 O66968]
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{{#set: common name=desthiobiotin|DTB}}
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** [http://www.uniprot.org/uniprot/Q9JUA2 Q9JUA2]
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{{#set: consumed by=2.8.1.6-RXN|RXN-17472}}
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** [http://www.uniprot.org/uniprot/P43848 P43848]
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{{#set: produced by=DETHIOBIOTIN-SYN-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PME0 Q9PME0]
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** [http://www.uniprot.org/uniprot/Q64737 Q64737]
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** [http://www.uniprot.org/uniprot/P20772 P20772]
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** [http://www.uniprot.org/uniprot/Q55422 Q55422]
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** [http://www.uniprot.org/uniprot/P52424 P52424]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-6.3.3.1}}
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{{#set: gene associated=Tiso_gene_1369}}
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{{#set: in pathway=PWY-6121|PWY-6122|PWY-6277}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:14, 10 January 2018

Metabolite DETHIOBIOTIN

  • smiles:
    • CC1(NC(=O)NC1CCCCCC(=O)[O-])
  • inchi key:
    • InChIKey=AUTOLBMXDDTRRT-UHFFFAOYSA-M
  • common name:
    • dethiobiotin
  • molecular weight:
    • 213.256
  • Synonym(s):
    • desthiobiotin
    • DTB

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 533-48-2
  • PUBCHEM:
  • HMDB : HMDB03581
  • LIGAND-CPD:
  • CHEBI:
  • BIGG : dtbt
"CC1(NC(=O)NC1CCCCCC(=O)[O-])" cannot be used as a page name in this wiki.




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