Difference between revisions of "RXN-17113"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5217 RXN0-5217] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Gene == Gene Tiso_gene_15398 == * left end position: ** 12 * transcription direction: ** POSITIVE * right end position: ** 2892 * centisome position: ** 0.2382370...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5217 RXN0-5217] ==
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== Gene Tiso_gene_15398 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 12
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.5.1 EC-2.5.1]
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** POSITIVE
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* right end position:
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** 2892
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* centisome position:
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** 0.23823704   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[3.1.3.46-RXN]]
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** 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CADAVERINE]][c] '''=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[CPD0-1065]][c] '''+''' 1 [[PROTON]][c]
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** experimental_annotation
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* With common name(s):
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***automated-name-match
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** 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 cadaverine[c] '''=>''' 1 S-methyl-5'-thioadenosine[c] '''+''' 1 aminopropylcadaverine[c] '''+''' 1 H+[c]
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** [[pantograph]]-[[creinhardtii]]
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* [[6-PHOSPHOFRUCTO-2-KINASE-RXN]]
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== Genes associated with this reaction  ==
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** in-silico_annotation
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Genes have been associated with this reaction based on different elements listed below.
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***ec-number
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* [[Tiso_gene_17803]]
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** experimental_annotation
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** [[pantograph]]-[[athaliana]]
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***ec-number
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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** [[pantograph]]-[[creinhardtii]]
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* [[PWY0-1303]], aminopropylcadaverine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1303 PWY0-1303]
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* [[F16BDEPHOS-RXN]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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** in-silico_annotation
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== Reconstruction information  ==
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***automated-name-match
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* [[orthology]]:
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== Pathways associated ==
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** [[pantograph]]:
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* [[P185-PWY]]
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*** [[athaliana]]
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* [[GLUCONEO-PWY]]
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*** [[esiliculosus]]
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* [[SUCSYN-PWY]]
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* [[GLYCOLYSIS]]
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* [[CALVIN-PWY]]
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* [[PWY-5484]]
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* [[PWY66-423]]
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* [[PWY66-399]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=12}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33387 33387]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2892}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08359 R08359]
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{{#set: centisome position=0.23823704    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=3.1.3.46-RXN|6-PHOSPHOFRUCTO-2-KINASE-RXN|F16BDEPHOS-RXN}}
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{{#set: ec number=EC-2.5.1}}
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{{#set: pathway associated=P185-PWY|GLUCONEO-PWY|SUCSYN-PWY|GLYCOLYSIS|CALVIN-PWY|PWY-5484|PWY66-423|PWY66-399}}
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{{#set: gene associated=Tiso_gene_17803}}
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{{#set: in pathway=PWY0-1303}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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Revision as of 18:15, 10 January 2018

Gene Tiso_gene_15398

  • left end position:
    • 12
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2892
  • centisome position:
    • 0.23823704
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-17113&oldid=16886"