Difference between revisions of "Tiso gene 19413"

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(Created page with "Category:Gene == Gene Tiso_gene_16795 == * left end position: ** 3823 * transcription direction: ** NEGATIVE * right end position: ** 6204 * centisome position: ** 53.2377...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.59-RXN 4.2.1.59-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase *...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_16795 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.59-RXN 4.2.1.59-RXN] ==
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* left end position:
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* direction:
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** 3823
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** polyketide_synthase
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* right end position:
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* ec number:
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** 6204
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** 53.237713   
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.3.99.23-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[3-Hydroxy-octanoyl-ACPs]][c] '''=>''' 1 [[2-Octenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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***ec-number
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* With common name(s):
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* [[R95]]
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** 1 a (3R)-3-hydroxyoctanoyl-[acp][c] '''=>''' 1 a trans oct-2-enoyl-[acp][c] '''+''' 1 H2O[c]
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** [[pantograph]]-[[synechocystis]]
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* [[R96]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13394]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10876]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6884]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_135]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_136]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_500]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6885]]
 
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[synechocystis]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3823}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=polyketide_synthase}}
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{{#set: right end position=6204}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: centisome position=53.237713    }}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: reaction associated=1.3.99.23-RXN|R95|R96}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: gene associated=Tiso_gene_13394|Tiso_gene_10876|Tiso_gene_6884|Tiso_gene_135|Tiso_gene_136|Tiso_gene_500|Tiso_gene_6885}}
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{{#set: in pathway=PWY-5971|PWY-5994}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:18, 10 January 2018

Reaction 4.2.1.59-RXN

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19413&oldid=17130"