Difference between revisions of "Tiso gene 9914"

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(Created page with "Category:Gene == Gene Tiso_gene_10824 == * left end position: ** 2526 * transcription direction: ** POSITIVE * right end position: ** 3207 * centisome position: ** 30.5626...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN] == * direction: ** LEFT-TO-R...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_10824 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN] ==
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* left end position:
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* direction:
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** 2526
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/4.1.2.52 EC-4.1.2.52]
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* right end position:
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** 3207
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* centisome position:
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** 30.562613   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ADENOSINETRIPHOSPHATASE-RXN]]
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* With identifiers:
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** 1 [[CPD-804]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[SUCC-S-ALD]][c]
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* With common name(s):
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** 1 (4S)-4-hydroxy-2-oxoheptanedioate[c] '''=>''' 1 pyruvate[c] '''+''' 1 succinate semialdehyde[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_13940]]
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** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[ATPASE-RXN]]
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== Pathways  ==
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** in-silico_annotation
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]
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***ec-number
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** '''2''' reactions found over '''8''' reactions in the full pathway
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== Pathways associated ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2526}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01647 R01647]
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{{#set: right end position=3207}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01645 R01645]
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{{#set: centisome position=30.562613    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=ADENOSINETRIPHOSPHATASE-RXN|ATPASE-RXN}}
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{{#set: ec number=EC-4.1.2.52}}
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{{#set: gene associated=Tiso_gene_13940}}
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{{#set: in pathway=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}

Revision as of 17:18, 10 January 2018

Reaction 4-HYDROXY-2-KETOPIMELATE-LYSIS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (4S)-4-hydroxy-2-oxoheptanedioate[c] => 1 pyruvate[c] + 1 succinate semialdehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9914&oldid=17133"