Difference between revisions of "RXN-14014"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16627 RXN-16627] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10767 RXN-10767] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha_beta_hydrolase_fold_p...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16627 RXN-16627] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10767 RXN-10767] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
+
** alpha_beta_hydrolase_fold_protein
 +
** ORF
 +
** serine_esterase
 +
** sialate_o-acetylesterase-like_protein
 +
** lysophospholipase
 +
** alpha_beta_hydrolase
 +
** protein_chloroplastic
 +
** para-nitrobenzyl_esterase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
+
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3R-9Z-3-hydroxy-octadec-9-enoyl-ACPs]][c] '''=>''' 1 [[2E-9Z-octadeca-2-9-dienoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[Methyl-Jasmonates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[METOH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Jasmonic-Acids]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R,9Z)-3-hydroxy-octadec-9-enoyl-[acp][c] '''=>''' 1 a (2E,9Z)-octadeca-2,9-dienoyl-[acp][c] '''+''' 1 H2O[c]
+
** 1 a methyl jasmonate[c] '''+''' 1 H2O[c] '''=>''' 1 methanol[c] '''+''' 1 H+[c] '''+''' 1 a jasmonic acid[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_6884]]
+
* [[Tiso_gene_9429]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_1537]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_10066]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_1922]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_4650]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_1538]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_11351]]
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_2556]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_12686]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_17029]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_16518]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4606]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_19778]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
 
−
** '''10''' reactions found over '''14''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[esiliculosus]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 
*** [[experimental_annotation]]
 
*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase}}
+
{{#set: common name=alpha_beta_hydrolase_fold_protein}}
−
{{#set: ec number=EC-4.2.1.59}}
+
{{#set: common name=ORF}}
−
{{#set: gene associated=Tiso_gene_6884}}
+
{{#set: common name=serine_esterase}}
−
{{#set: in pathway=PWY-7664}}
+
{{#set: common name=sialate_o-acetylesterase-like_protein}}
 +
{{#set: common name=lysophospholipase}}
 +
{{#set: common name=alpha_beta_hydrolase}}
 +
{{#set: common name=protein_chloroplastic}}
 +
{{#set: common name=para-nitrobenzyl_esterase}}
 +
{{#set: ec number=EC-3.1.1.1}}
 +
{{#set: gene associated=Tiso_gene_9429|Tiso_gene_1537|Tiso_gene_10066|Tiso_gene_1922|Tiso_gene_4650|Tiso_gene_1538|Tiso_gene_11351|Tiso_gene_2556|Tiso_gene_12686|Tiso_gene_17029|Tiso_gene_16518|Tiso_gene_4606|Tiso_gene_19778}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation}}
+
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:18, 10 January 2018

Reaction RXN-10767

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • alpha_beta_hydrolase_fold_protein
    • ORF
    • serine_esterase
    • sialate_o-acetylesterase-like_protein
    • lysophospholipase
    • alpha_beta_hydrolase
    • protein_chloroplastic
    • para-nitrobenzyl_esterase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14014&oldid=17190"