Difference between revisions of "Tiso gene 8895"

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(Created page with "Category:Gene == Gene Tiso_gene_9823 == * left end position: ** 6352 * transcription direction: ** NEGATIVE * right end position: ** 9001 * centisome position: ** 70.22665...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_9823 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] ==
* left end position:
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* direction:
** 6352
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** LEFT-TO-RIGHT
* transcription direction:
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** NEGATIVE
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* right end position:
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** 9001
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* centisome position:
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** 70.22665   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[UDPGLUCEPIM-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''=>''' 1 [[4-TRIMETHYLAMMONIOBUTANAL]][c] '''+''' 1 [[GLY]][c]
***ec-number
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* With common name(s):
** experimental_annotation
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** 1 3-hydroxy-N6,N6,N6-trimethyl-L-lysine[c] '''=>''' 1 4-trimethylammoniobutanal[c] '''+''' 1 glycine[c]
***ec-number
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 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_13940]]
 
** [[pantograph]]-[[athaliana]]
 
** [[pantograph]]-[[athaliana]]
** [[pantograph]]-[[synechocystis]]
 
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
* [[UG4E]]
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== Pathways ==
** [[pantograph]]-[[creinhardtii]]
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* [[PWY-6100]], L-carnitine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6100 PWY-6100]
== Pathways associated ==
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** '''1''' reactions found over '''4''' reactions in the full pathway
* [[PWY-3821]]
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== Reconstruction information  ==
* [[PWY-6397]]
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* [[orthology]]:
* [[COLANSYN-PWY]]
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** [[pantograph]]:
* [[PWY-6527]]
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*** [[athaliana]]
* [[PWY-7328]]
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*** [[esiliculosus]]
* [[PWY-6317]]
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* [[PWY66-422]]
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* [[PWY-7344]]
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== External links  ==
 
== External links  ==
{{#set: left end position=6352}}
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* LIGAND-RXN:
{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03284 R03284]
{{#set: right end position=9001}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=70.22665    }}
+
{{#set: gene associated=Tiso_gene_13940}}
{{#set: reaction associated=UDPGLUCEPIM-RXN|UG4E}}
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{{#set: in pathway=PWY-6100}}
{{#set: pathway associated=PWY-3821|PWY-6397|COLANSYN-PWY|PWY-6527|PWY-7328|PWY-6317|PWY66-422|PWY-7344}}
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{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=athaliana|esiliculosus}}

Revision as of 18:18, 10 January 2018

Reaction RXN-9896

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6100, L-carnitine biosynthesis: PWY-6100
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links