Difference between revisions of "RXN-16621"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] == * direction: ** LEF...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6554 RXN0-6554] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6554 RXN0-6554] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** ORF
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.2.2.9 EC-3.2.2.9]
+
** [http://enzyme.expasy.org/EC/1.3.5.2 EC-1.3.5.2]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[CPD-564]][c]
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** 1 [[DI-H-OROTATE]][c] '''+''' 1 [[Menaquinones]][c] '''=>''' 1 [[OROTATE]][c] '''+''' 1 [[Menaquinols]][c]
 
* With common name(s):
 
* With common name(s):
** 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H2O[c] '''=>''' 1 adenine[c] '''+''' 1 S-ribosyl-L-homocysteine[c]
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** 1 (S)-dihydroorotate[c] '''+''' 1 a menaquinone[c] '''=>''' 1 orotate[c] '''+''' 1 a menaquinol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_14191]]
+
* [[Tiso_gene_5280]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_4735]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-6154]], autoinducer AI-2 biosynthesis II (Vibrio): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6154 PWY-6154]
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-6153]], autoinducer AI-2 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6153 PWY-6153]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
 
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17805 17805]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00194 R00194]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q9JV64 Q9JV64]
 
** [http://www.uniprot.org/uniprot/Q9PJ10 Q9PJ10]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-3.2.2.9}}
+
{{#set: common name=ORF}}
{{#set: gene associated=Tiso_gene_14191}}
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{{#set: ec number=EC-1.3.5.2}}
{{#set: in pathway=PWY-6154|PWY-6151|PWY-6153|PWY-I9}}
+
{{#set: gene associated=Tiso_gene_5280|Tiso_gene_4735}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=esiliculosus}}
 
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:21, 10 January 2018

Reaction RXN0-6554

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links