Difference between revisions of "Tiso gene 6004"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1281 RXN0-1281] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydrouridine synthase **...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NITRITE NITRITE] == * smiles: ** N([O-])=O * inchi key: ** InChIKey=IOVCWXUNBOPUCH-UHFFFAOYSA-M...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1281 RXN0-1281] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=NITRITE NITRITE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** N([O-])=O
 +
* inchi key:
 +
** InChIKey=IOVCWXUNBOPUCH-UHFFFAOYSA-M
 
* common name:
 
* common name:
−
** dihydrouridine synthase
+
** nitrite
−
** trna-dihydrouridine_synthase
+
* molecular weight:
−
* ec number:
+
** 46.005   
−
** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** NO2
 +
** NO2-
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
−
** 1 [[tRNA-uridines]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[tRNA-Dihydrouridines]][c]
+
* [[TRANS-RXN-137]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 a uridine in tRNA[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 a 5,6-dihydrouridine in tRNA[c]
+
* [[TRANS-RXN-137]]
−
 
+
* [[RXN-3661]]
−
== Genes associated with this reaction  ==
+
* [[NITRATE-REDUCTASE-NADH-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
== Reaction(s) of unknown directionality ==
−
* [[Tiso_gene_8241]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_15416]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15890]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_5731]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15286]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_8242]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_7714]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_15154]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_12147]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_4505]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_15285]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* CAS : 7697-37-2
−
{{#set: common name=dihydrouridine synthase}}
+
* CAS : 14797-65-0
−
{{#set: common name=trna-dihydrouridine_synthase}}
+
* METABOLIGHTS : MTBLC16301
−
{{#set: ec number=EC-1.1.1}}
+
* PUBCHEM:
−
{{#set: gene associated=Tiso_gene_8241|Tiso_gene_15416|Tiso_gene_15890|Tiso_gene_5731|Tiso_gene_15286|Tiso_gene_8242|Tiso_gene_7714|Tiso_gene_15154|Tiso_gene_12147|Tiso_gene_4505|Tiso_gene_15285}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=946 946]
−
{{#set: in pathway=}}
+
* HMDB : HMDB02786
−
{{#set: reconstruction category=orthology}}
+
* LIGAND-CPD:
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00088 C00088]
−
{{#set: reconstruction source=esiliculosus}}
+
* CHEMSPIDER:
−
{{#set: reconstruction category=annotation}}
+
** [http://www.chemspider.com/Chemical-Structure.921.html 921]
−
{{#set: reconstruction tool=pathwaytools}}
+
* CHEBI:
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16301 16301]
 +
* BIGG : no2
 +
{{#set: smiles=N([O-])=O}}
 +
{{#set: inchi key=InChIKey=IOVCWXUNBOPUCH-UHFFFAOYSA-M}}
 +
{{#set: common name=nitrite}}
 +
{{#set: molecular weight=46.005    }}
 +
{{#set: common name=NO2|NO2-}}
 +
{{#set: consumed by=FERREDOXIN--NITRITE-REDUCTASE-RXN|TRANS-RXN-137}}
 +
{{#set: produced by=TRANS-RXN-137|RXN-3661|NITRATE-REDUCTASE-NADH-RXN}}

Revision as of 18:21, 10 January 2018

Metabolite NITRITE

  • smiles:
    • N([O-])=O
  • inchi key:
    • InChIKey=IOVCWXUNBOPUCH-UHFFFAOYSA-M
  • common name:
    • nitrite
  • molecular weight:
    • 46.005
  • Synonym(s):
    • NO2
    • NO2-

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 7697-37-2
  • CAS : 14797-65-0
  • METABOLIGHTS : MTBLC16301
  • PUBCHEM:
  • HMDB : HMDB02786
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : no2
"N([O-])=O" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6004&oldid=17399"