Difference between revisions of "CRPB-all-trans-Retinal"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1147 RXN0-1147] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.3...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANPRIBOSYLTRAN-RXN XANPRIBOSYLTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** xanthin...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1147 RXN0-1147] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANPRIBOSYLTRAN-RXN XANPRIBOSYLTRAN-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** xanthine_phosphoribosyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.61 EC-2.3.1.61]
+
** [http://enzyme.expasy.org/EC/2.4.2.22 EC-2.4.2.22]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Oxo-glutarate-dehydrogenase-DH-lipoyl]][c] '''+''' 1 [[SUC-COA]][c] '''<=>''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c] '''+''' 1 [[CO-A]][c]
+
** 1 [[XANTHINE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 succinyl-CoA[c] '''<=>''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine[c] '''+''' 1 coenzyme A[c]
+
** 1 xanthine[c] '''+''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''=>''' 1 XMP[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_13506]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
+
* [[SALVPURINE2-PWY]], xanthine and xanthosine salvage: [http://metacyc.org/META/NEW-IMAGE?object=SALVPURINE2-PWY SALVPURINE2-PWY]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* [[annotation]]:
−
** [[primary_network]]
+
** [[pathwaytools]]:
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10800 10800]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01940 R01940]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02142 R02142]
−
** [http://www.genome.jp/dbget-bin/www_bget?R02570 R02570]
+
* UNIPROT:
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/P43859 P43859]
−
{{#set: ec number=EC-2.3.1.61}}
+
** [http://www.uniprot.org/uniprot/P0A9M5 P0A9M5]
−
{{#set: in pathway=PWY-5084|PWY66-398}}
+
** [http://www.uniprot.org/uniprot/P0A277 P0A277]
−
{{#set: reconstruction category=manual}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction source=primary_network}}
+
{{#set: common name=xanthine_phosphoribosyltransferase}}
 +
{{#set: ec number=EC-2.4.2.22}}
 +
{{#set: gene associated=Tiso_gene_13506}}
 +
{{#set: in pathway=SALVPURINE2-PWY}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:23, 10 January 2018

Reaction XANPRIBOSYLTRAN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xanthine_phosphoribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 xanthine[c] + 1 5-phospho-α-D-ribose 1-diphosphate[c] => 1 XMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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