Difference between revisions of "Tiso gene 20417"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14225 RXN-14225] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSDECARBOX-RXN LYSDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14225 RXN-14225] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSDECARBOX-RXN LYSDECARBOX-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
+
** [http://enzyme.expasy.org/EC/4.1.1.18 EC-4.1.1.18]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[D-GLUCURONOLACTONE]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[WATER]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[D-GLUCARATE]][c] '''+''' 3 [[PROTON]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[LYS]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CADAVERINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-glucurono-6,3-lactone[c] '''+''' 1 NAD+[c] '''+''' 2 H2O[c] '''<=>''' 1 NADH[c] '''+''' 1 D-glucarate[c] '''+''' 3 H+[c]
+
** 1 H+[c] '''+''' 1 L-lysine[c] '''=>''' 1 CO2[c] '''+''' 1 cadaverine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3513]]
+
* [[Tiso_gene_10395]]
−
** [[pantograph]]-[[athaliana]]
+
** [[pantograph]]-[[synechocystis]]
−
* [[Tiso_gene_7322]]
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY0-461]], L-lysine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-461 PWY0-461]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5468]], lupanine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5468 PWY-5468]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6381]], bisucaberin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6381 PWY-6381]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY0-1303]], aminopropylcadaverine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1303 PWY0-1303]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6328]], L-lysine degradation X: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6328 PWY-6328]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6375]], desferrioxamine E biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6375 PWY-6375]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6376]], desferrioxamine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6376 PWY-6376]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[athaliana]]
+
*** [[synechocystis]]
−
*** [[esiliculosus]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30886 30886]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22352 22352]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02957 R02957]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00462 R00462]
−
{{#set: direction=REVERSIBLE}}
+
* UNIPROT:
−
{{#set: ec number=EC-1.2.1.3}}
+
** [http://www.uniprot.org/uniprot/P05033 P05033]
−
{{#set: gene associated=Tiso_gene_3513|Tiso_gene_7322}}
+
** [http://www.uniprot.org/uniprot/P21885 P21885]
−
{{#set: in pathway=}}
+
** [http://www.uniprot.org/uniprot/P0A9H3 P0A9H3]
 +
** [http://www.uniprot.org/uniprot/P52095 P52095]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-4.1.1.18}}
 +
{{#set: gene associated=Tiso_gene_10395}}
 +
{{#set: in pathway=PWY0-461|PWY-5468|PWY-6381|PWY0-1303|PWY-6328|PWY-6375|PWY-6376}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
{{#set: reconstruction source=synechocystis}}

Revision as of 18:26, 10 January 2018

Reaction LYSDECARBOX-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-461, L-lysine degradation I: PWY0-461
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5468, lupanine biosynthesis: PWY-5468
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6381, bisucaberin biosynthesis: PWY-6381
    • 1 reactions found over 5 reactions in the full pathway
  • PWY0-1303, aminopropylcadaverine biosynthesis: PWY0-1303
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6328, L-lysine degradation X: PWY-6328
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6375, desferrioxamine E biosynthesis: PWY-6375
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6376, desferrioxamine B biosynthesis: PWY-6376
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




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