Difference between revisions of "Tiso gene 7495"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROKAEMPFEROL-4-REDUCTASE-RXN DIHYDROKAEMPFEROL-4-REDUCTASE-RXN] == * direction: ** LEFT-TO-RIG...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] == * direction: ** REVERSIBLE * ec number: **...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROKAEMPFEROL-4-REDUCTASE-RXN DIHYDROKAEMPFEROL-4-REDUCTASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** dihydroflavonol-4-reductase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
+
** [http://enzyme.expasy.org/EC/3.5.4.9 EC-3.5.4.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[DIHYDROKAEMPFEROL-CMPD]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[LEUCOPELARGONIDIN-CMPD]][c]
+
** 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 (+)-dihydrokaempferol[c] '''=>''' 1 NADP+[c] '''+''' 1 (2R,3S,4S)-leucopelargonidin[c]
+
** 1 a 5,10-methenyltetrahydrofolate[c] '''+''' 1 H2O[c] '''<=>''' 1 H+[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_15272]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_9504]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_9503]]
 
−
** IN-SILICO_ANNOTATION
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[Tiso_gene_11016]]
 
−
** [[pantograph]]-[[athaliana]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
+
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5030]], L-histidine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5030 PWY-5030]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 +
** '''4''' reactions found over '''17''' reactions in the full pathway
 +
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
 +
** '''7''' reactions found over '''24''' reactions in the full pathway
 +
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 +
** '''7''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-6613]], tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6613 PWY-6613]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* [[manual]]:
−
** [[pantograph]]:
+
** [[primary_network]]
−
*** [[athaliana]]
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23019 23019]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23700 23700]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03123 R03123]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01655 R01655]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P51102 P51102]
+
** [http://www.uniprot.org/uniprot/P09440 P09440]
−
** [http://www.uniprot.org/uniprot/P14720 P14720]
+
** [http://www.uniprot.org/uniprot/P07245 P07245]
−
** [http://www.uniprot.org/uniprot/P14721 P14721]
+
** [http://www.uniprot.org/uniprot/P11586 P11586]
−
** [http://www.uniprot.org/uniprot/P51106 P51106]
+
** [http://www.uniprot.org/uniprot/P18155 P18155]
−
** [http://www.uniprot.org/uniprot/P51105 P51105]
+
** [http://www.uniprot.org/uniprot/P44313 P44313]
−
** [http://www.uniprot.org/uniprot/P51107 P51107]
+
** [http://www.uniprot.org/uniprot/P47259 P47259]
−
** [http://www.uniprot.org/uniprot/P73212 P73212]
+
** [http://www.uniprot.org/uniprot/P13995 P13995]
−
** [http://www.uniprot.org/uniprot/O82105 O82105]
+
** [http://www.uniprot.org/uniprot/P54382 P54382]
−
** [http://www.uniprot.org/uniprot/Q9SAN4 Q9SAN4]
+
** [http://www.uniprot.org/uniprot/O67736 O67736]
−
** [http://www.uniprot.org/uniprot/P93776 P93776]
+
** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9]
−
** [http://www.uniprot.org/uniprot/P93777 P93777]
+
** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68]
−
** [http://www.uniprot.org/uniprot/P94105 P94105]
+
** [http://www.uniprot.org/uniprot/P24186 P24186]
−
** [http://www.uniprot.org/uniprot/O22589 O22589]
+
** [http://www.uniprot.org/uniprot/Q04448 Q04448]
−
** [http://www.uniprot.org/uniprot/O22605 O22605]
+
** [http://www.uniprot.org/uniprot/Q60006 Q60006]
−
** [http://www.uniprot.org/uniprot/P51104 P51104]
+
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
−
** [http://www.uniprot.org/uniprot/Q9ZNV0 Q9ZNV0]
+
** [http://www.uniprot.org/uniprot/P51696 P51696]
−
** [http://www.uniprot.org/uniprot/Q9SAY2 Q9SAY2]
+
** [http://www.uniprot.org/uniprot/O68031 O68031]
−
** [http://www.uniprot.org/uniprot/P93840 P93840]
+
** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6]
−
{{#set: common name=dihydroflavonol-4-reductase}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-1.1.1.219}}
+
{{#set: ec number=EC-3.5.4.9}}
−
{{#set: gene associated=Tiso_gene_15272|Tiso_gene_9504|Tiso_gene_9503|Tiso_gene_11016}}
+
{{#set: in pathway=PWY-1722|PWY-3841|1CMET2-PWY|PWY-5030|P164-PWY|CODH-PWY|PWY-5497|PWY-2201|PWY-6613}}
−
{{#set: in pathway=PWY1F-823}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=primary_network}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=athaliana|esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 17:26, 10 January 2018

Reaction METHENYLTHFCYCLOHYDRO-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate: PWY-1722
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3841, folate transformations II: PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • 1CMET2-PWY, N10-formyl-tetrahydrofolate biosynthesis: 1CMET2-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5030, L-histidine degradation III: PWY-5030
    • 1 reactions found over 6 reactions in the full pathway
  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 4 reactions found over 17 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
    • 7 reactions found over 24 reactions in the full pathway
  • PWY-2201, folate transformations I: PWY-2201
    • 7 reactions found over 12 reactions in the full pathway
  • PWY-6613, tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: PWY-6613
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links



Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7495&oldid=17816"