Difference between revisions of "Tiso gene 13558"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMPCYCLOHYDROLASE-RXN IMPCYCLOHYDROLASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://...")
 
(Created page with "Category:Gene == Gene Tiso_gene_19431 == * left end position: ** 119 * transcription direction: ** POSITIVE * right end position: ** 2327 * centisome position: ** 5.109489...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IMPCYCLOHYDROLASE-RXN IMPCYCLOHYDROLASE-RXN] ==
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== Gene Tiso_gene_19431 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 119
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.4.10 EC-3.5.4.10]
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** POSITIVE
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* right end position:
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** 2327
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* centisome position:
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** 5.109489   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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** 1 [[IMP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 IMP[c] '''+''' 1 H2O[c] '''<=>''' 1 5-formamido-1-(5-phospho-D-ribosyl)-imidazole-4-carboxamide[c]
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** experimental_annotation
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***ec-number
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18420]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways associated ==
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== Pathways ==
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* [[PWY-6123]], inosine-5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6123 PWY-6123]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6124]], inosine-5'-phosphate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6124 PWY-6124]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7234]], inosine-5'-phosphate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7234 PWY-7234]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=119}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18445 18445]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2327}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01127 R01127]
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{{#set: centisome position=5.109489    }}
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* UNIPROT:
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/P43852 P43852]
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** [http://www.uniprot.org/uniprot/P12048 P12048]
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** [http://www.uniprot.org/uniprot/P31335 P31335]
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** [http://www.uniprot.org/uniprot/P26978 P26978]
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** [http://www.uniprot.org/uniprot/P15639 P15639]
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** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
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** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
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** [http://www.uniprot.org/uniprot/P31939 P31939]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-3.5.4.10}}
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{{#set: gene associated=Tiso_gene_18420}}
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{{#set: in pathway=PWY-6123|PWY-6124|PWY-7234}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|esiliculosus|athaliana}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 17:28, 10 January 2018

Gene Tiso_gene_19431

  • left end position:
    • 119
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2327
  • centisome position:
    • 5.109489
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13558&oldid=17986"