Difference between revisions of "RXN-9556"

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(Created page with "Category:Gene == Gene Tiso_gene_14109 == * left end position: ** 3181 * transcription direction: ** POSITIVE * right end position: ** 5747 * centisome position: ** 54.4785...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.4.4-RXN 1.2.4.4-RXN] == * direction: ** REVERSIBLE * common name: ** 3-methyl-2-oxobutanoate_de...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_14109 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.2.4.4-RXN 1.2.4.4-RXN] ==
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* left end position:
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* direction:
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** 3181
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** REVERSIBLE
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* transcription direction:
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* common name:
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** POSITIVE
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** 3-methyl-2-oxobutanoate_dehydrogenase
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* right end position:
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** 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
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** 5747
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
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** 54.478508   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-12086]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[BCAA-dehydrogenase-2MP-DH-lipoyl]][c]
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***ec-number
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* With common name(s):
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* [[RXN-12579]]
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** 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H+[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''<=>''' 1 CO2[c] '''+''' 1 an [apo BCAA dehydrogenase E2 protein] N6-S-[2-methylpropanoyl]dihydrolipoyl-L-lysine[c]
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** in-silico_annotation
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***ec-number
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== Genes associated with this reaction  ==
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* [[TRIACYLGLYCEROL-LIPASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** in-silico_annotation
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* [[Tiso_gene_11793]]
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***ec-number
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***AUTOMATED-NAME-MATCH
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* [[LIPAS-PWY]]
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* [[Tiso_gene_18084]]
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* [[PWY-6857]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_3260]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-5046]], 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5046 PWY-5046]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
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* [[orthology]]:
 +
** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
 +
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3181}}
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* LIGAND-RXN:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01701 R01701]
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{{#set: right end position=5747}}
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* UNIPROT:
−
{{#set: centisome position=54.478508    }}
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** [http://www.uniprot.org/uniprot/P21839 P21839]
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{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
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** [http://www.uniprot.org/uniprot/P21953 P21953]
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{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
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** [http://www.uniprot.org/uniprot/P37940 P37940]
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
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** [http://www.uniprot.org/uniprot/P37941 P37941]
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** [http://www.uniprot.org/uniprot/P11178 P11178]
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** [http://www.uniprot.org/uniprot/P12694 P12694]
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** [http://www.uniprot.org/uniprot/P09061 P09061]
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** [http://www.uniprot.org/uniprot/P09060 P09060]
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** [http://www.uniprot.org/uniprot/P11960 P11960]
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** [http://www.uniprot.org/uniprot/O84344 O84344]
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
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** [http://www.uniprot.org/uniprot/P35738 P35738]
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** [http://www.uniprot.org/uniprot/P50136 P50136]
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** [http://www.uniprot.org/uniprot/O48615 O48615]
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** [http://www.uniprot.org/uniprot/O03849 O03849]
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
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** [http://www.uniprot.org/uniprot/O82450 O82450]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-methyl-2-oxobutanoate_dehydrogenase}}
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{{#set: common name=2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial}}
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{{#set: ec number=EC-1.2.4.4}}
 +
{{#set: gene associated=Tiso_gene_11793|Tiso_gene_18084|Tiso_gene_3260}}
 +
{{#set: in pathway=PWY-5046}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:30, 10 January 2018

Reaction 1.2.4.4-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 3-methyl-2-oxobutanoate_dehydrogenase
    • 2-oxoisovalerate_dehydrogenase_alpha_subunit_mitochondrial
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5046, 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: PWY-5046
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-9556&oldid=18108"