Difference between revisions of "RXN-4230"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTI-RXN RIBONUCLEOSIDE-DIP-REDUCTI-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DXPREDISOM-RXN DXPREDISOM-RXN] == * direction: ** REVERSIBLE * common name: ** 1-deoxy-d-xylulose_5...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBONUCLEOSIDE-DIP-REDUCTI-RXN RIBONUCLEOSIDE-DIP-REDUCTI-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DXPREDISOM-RXN DXPREDISOM-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** ribonucleoside-diphosphate_reductase
+
** 1-deoxy-d-xylulose_5-phosphate_reductoisomerase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.267 EC-1.1.1.267]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[Ribonucleoside-Diphosphates]][c] '''=>''' 1 [[Deoxy-Ribonucleoside-Diphosphates]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
+
** 1 [[2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[DEOXYXYLULOSE-5P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a reduced thioredoxin[c] '''+''' 1 a ribonucleoside diphosphate[c] '''=>''' 1 a 2'-deoxyribonucleoside 5'-diphosphate[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized thioredoxin[c]
+
** 1 2-C-methyl-D-erythritol 4-phosphate[c] '''+''' 1 NADP+[c] '''<=>''' 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 1-deoxy-D-xylulose 5-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9916]]
+
* [[Tiso_gene_15169]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_10138]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_9915]]
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_10617]]
 
 
** EXPERIMENTAL_ANNOTATION
 
** EXPERIMENTAL_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
 +
** [[pantograph]]-[[athaliana]]
 +
** [[pantograph]]-[[synechocystis]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
 +
** [[pantograph]]-[[creinhardtii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 +
*** [[creinhardtii]]
 +
*** [[synechocystis]]
 +
*** [[athaliana]]
 
*** [[esiliculosus]]
 
*** [[esiliculosus]]
 +
* [[manual]]:
 +
** [[primary_network]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23252 23252]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13717 13717]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04294 R04294]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05688 R05688]
−
* UNIPROT:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P89462 P89462]
+
{{#set: common name=1-deoxy-d-xylulose_5-phosphate_reductoisomerase}}
−
** [http://www.uniprot.org/uniprot/Q7M0K8 Q7M0K8]
+
{{#set: ec number=EC-1.1.1.267}}
−
** [http://www.uniprot.org/uniprot/Q91YM8 Q91YM8]
+
{{#set: gene associated=Tiso_gene_15169}}
−
** [http://www.uniprot.org/uniprot/P09938 P09938]
+
{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
−
** [http://www.uniprot.org/uniprot/Q8IL94 Q8IL94]
+
−
** [http://www.uniprot.org/uniprot/P32984 P32984]
+
−
** [http://www.uniprot.org/uniprot/P50647 P50647]
+
−
** [http://www.uniprot.org/uniprot/P50650 P50650]
+
−
** [http://www.uniprot.org/uniprot/P50620 P50620]
+
−
** [http://www.uniprot.org/uniprot/O83972 O83972]
+
−
** [http://www.uniprot.org/uniprot/P43755 P43755]
+
−
** [http://www.uniprot.org/uniprot/Q9PJ87 Q9PJ87]
+
−
** [http://www.uniprot.org/uniprot/P39452 P39452]
+
−
** [http://www.uniprot.org/uniprot/O66503 O66503]
+
−
** [http://www.uniprot.org/uniprot/Q9JU45 Q9JU45]
+
−
** [http://www.uniprot.org/uniprot/P47473 P47473]
+
−
** [http://www.uniprot.org/uniprot/P37146 P37146]
+
−
** [http://www.uniprot.org/uniprot/O26748 O26748]
+
−
** [http://www.uniprot.org/uniprot/O28609 O28609]
+
−
** [http://www.uniprot.org/uniprot/Q9PIR3 Q9PIR3]
+
−
** [http://www.uniprot.org/uniprot/Q9JU43 Q9JU43]
+
−
** [http://www.uniprot.org/uniprot/P55982 P55982]
+
−
** [http://www.uniprot.org/uniprot/P03190 P03190]
+
−
** [http://www.uniprot.org/uniprot/P00452 P00452]
+
−
** [http://www.uniprot.org/uniprot/P69924 P69924]
+
−
** [http://www.uniprot.org/uniprot/P07201 P07201]
+
−
** [http://www.uniprot.org/uniprot/P26713 P26713]
+
−
** [http://www.uniprot.org/uniprot/P11158 P11158]
+
−
** [http://www.uniprot.org/uniprot/P11157 P11157]
+
−
** [http://www.uniprot.org/uniprot/P23921 P23921]
+
−
** [http://www.uniprot.org/uniprot/P31350 P31350]
+
−
** [http://www.uniprot.org/uniprot/Q60561 Q60561]
+
−
** [http://www.uniprot.org/uniprot/Q03604 Q03604]
+
−
** [http://www.uniprot.org/uniprot/P37426 P37426]
+
−
** [http://www.uniprot.org/uniprot/P17424 P17424]
+
−
** [http://www.uniprot.org/uniprot/P36602 P36602]
+
−
** [http://www.uniprot.org/uniprot/P36603 P36603]
+
−
** [http://www.uniprot.org/uniprot/P50643 P50643]
+
−
** [http://www.uniprot.org/uniprot/P50645 P50645]
+
−
** [http://www.uniprot.org/uniprot/Q66662 Q66662]
+
−
** [http://www.uniprot.org/uniprot/Q66663 Q66663]
+
−
** [http://www.uniprot.org/uniprot/P49723 P49723]
+
−
** [http://www.uniprot.org/uniprot/P50651 P50651]
+
−
** [http://www.uniprot.org/uniprot/P78027 P78027]
+
−
** [http://www.uniprot.org/uniprot/P74240 P74240]
+
−
** [http://www.uniprot.org/uniprot/O36410 O36410]
+
−
** [http://www.uniprot.org/uniprot/O36411 O36411]
+
−
** [http://www.uniprot.org/uniprot/P49730 P49730]
+
−
** [http://www.uniprot.org/uniprot/Q89941 Q89941]
+
−
** [http://www.uniprot.org/uniprot/Q98526 Q98526]
+
−
** [http://www.uniprot.org/uniprot/O41111 O41111]
+
−
** [http://www.uniprot.org/uniprot/Q9YMK7 Q9YMK7]
+
−
** [http://www.uniprot.org/uniprot/Q9YMI1 Q9YMI1]
+
−
** [http://www.uniprot.org/uniprot/Q9YMI0 Q9YMI0]
+
−
** [http://www.uniprot.org/uniprot/O57175 O57175]
+
−
** [http://www.uniprot.org/uniprot/O39262 O39262]
+
−
** [http://www.uniprot.org/uniprot/O39263 O39263]
+
−
** [http://www.uniprot.org/uniprot/Q9YTK7 Q9YTK7]
+
−
** [http://www.uniprot.org/uniprot/Q9YTK6 Q9YTK6]
+
−
** [http://www.uniprot.org/uniprot/Q9UW15 Q9UW15]
+
−
** [http://www.uniprot.org/uniprot/Q9SJ20 Q9SJ20]
+
−
** [http://www.uniprot.org/uniprot/P03175 P03175]
+
−
** [http://www.uniprot.org/uniprot/P09247 P09247]
+
−
** [http://www.uniprot.org/uniprot/P09248 P09248]
+
−
** [http://www.uniprot.org/uniprot/P28847 P28847]
+
−
** [http://www.uniprot.org/uniprot/P28846 P28846]
+
−
** [http://www.uniprot.org/uniprot/P69520 P69520]
+
−
** [http://www.uniprot.org/uniprot/Q01319 Q01319]
+
−
** [http://www.uniprot.org/uniprot/P10224 P10224]
+
−
** [http://www.uniprot.org/uniprot/P16782 P16782]
+
−
** [http://www.uniprot.org/uniprot/P20503 P20503]
+
−
** [http://www.uniprot.org/uniprot/P26685 P26685]
+
−
** [http://www.uniprot.org/uniprot/P12848 P12848]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=ribonucleoside-diphosphate_reductase}}
+
−
{{#set: ec number=EC-1.17.4.1}}
+
−
{{#set: gene associated=Tiso_gene_9916|Tiso_gene_10138|Tiso_gene_9915|Tiso_gene_10617}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:30, 10 January 2018

Reaction DXPREDISOM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 1-deoxy-d-xylulose_5-phosphate_reductoisomerase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7560, methylerythritol phosphate pathway II: PWY-7560
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-4230&oldid=18166"