Difference between revisions of "Tiso gene 4560"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] == * direction: ** LEFT-TO-RIGHT * common name: ** chloroplast_beta-keto_acyl_...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11135 RXN-11135] == * direction: ** REVERSIBLE * common name: ** dna_helicase * ec number: ** [...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11135 RXN-11135] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** chloroplast_beta-keto_acyl_reductase
+
** dna_helicase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
+
** [http://enzyme.expasy.org/EC/3.6.4.12 EC-3.6.4.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-14423]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[CPD-14424]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Double-helix-DNA]][c] '''<=>''' 1 [[Unwound-DNA]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-oxo-docosapentaenoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] '''+''' 1 NAD(P)+[c]
+
** 1 ATP[c] '''+''' 1 H2O[c] '''+''' 1 a double-helix DNA[c] '''<=>''' 1 an unwound double-stranded DNA[c] '''+''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9871]]
+
* [[Tiso_gene_1324]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_13083]]
 
−
** EXPERIMENTAL_ANNOTATION
 
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_1799]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_9885]]
+
* [[Tiso_gene_4088]]
−
** EXPERIMENTAL_ANNOTATION
+
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_4087]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_7734]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_7081]]
 +
** IN-SILICO_ANNOTATION
 
***AUTOMATED-NAME-MATCH
 
***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 
−
** '''14''' reactions found over '''14''' reactions in the full pathway
 
−
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
Line 42: Line 40:
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
−
*** [[experimental_annotation]]
 
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=chloroplast_beta-keto_acyl_reductase}}
+
{{#set: common name=dna_helicase}}
−
{{#set: ec number=EC-1.1.1.330}}
+
{{#set: ec number=EC-3.6.4.12}}
−
{{#set: gene associated=Tiso_gene_9871|Tiso_gene_13083|Tiso_gene_9885}}
+
{{#set: gene associated=Tiso_gene_1324|Tiso_gene_1799|Tiso_gene_4088|Tiso_gene_4087|Tiso_gene_7734|Tiso_gene_7081}}
−
{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
Line 55: Line 52:
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 18:32, 10 January 2018

Reaction RXN-11135

  • direction:
    • REVERSIBLE
  • common name:
    • dna_helicase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 H2O[c] + 1 a double-helix DNA[c] <=> 1 an unwound double-stranded DNA[c] + 1 ADP[c] + 1 H+[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4560&oldid=18276"