Difference between revisions of "Tiso gene 9435"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPSYN-RXN ATPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** v-type_proton_atpase ** ORF...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYL-MALONYL-COA METHYL-MALONYL-COA] == * smiles: ** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ATPSYN-RXN ATPSYN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=METHYL-MALONYL-COA METHYL-MALONYL-COA] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O
 +
* inchi key:
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** InChIKey=MZFOKIKEPGUZEN-AGCMQPJKSA-I
 
* common name:
 
* common name:
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** v-type_proton_atpase
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** (R)-methylmalonyl-CoA
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** ORF
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* molecular weight:
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** vacuolar_h+-_sector_c
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** 862.568   
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** v-type_proton_atpase_catalytic_subunit_a
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** vacuolar_h+-atpase_v0_subunits_a
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** atp_synthase_gamma_chloroplastic
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** atp_synthase_gamma_subunit
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** atp_synthase_subunit_mitochondrial
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** ycf35
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** atp_synthase_delta_mitochondrial
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** v-type_proton_atpase_subunit_h
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** v-type_protonatpasesubunitd1
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.3.14 EC-3.6.3.14]
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* Synonym(s):
 
* Synonym(s):
 +
** L-methylmalonyl-CoA
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** methylmalonyl-CoA
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** methyl-malonyl-coenzyme A
 +
** CH3-malonyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Pi]][c] '''+''' 4 [[PROTON]][e] '''+''' 1 [[ADP]][c] '''<=>''' 1 [[WATER]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[ATP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[METHYLMALONYL-COA-MUT-RXN]]
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** 1 phosphate[c] '''+''' 4 H+[e] '''+''' 1 ADP[c] '''<=>''' 1 H2O[c] '''+''' 3 H+[c] '''+''' 1 ATP[c]
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−
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_11754]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9460]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12618]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_18105]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11192]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5307]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15850]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1366]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7213]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10981]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2798]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1365]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17383]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_7215]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11753]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_11155]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6012]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6592]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* LIGAND-CPD:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20852 20852]
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** [http://www.genome.jp/dbget-bin/www_bget?C01213 C01213]
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{{#set: direction=REVERSIBLE}}
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* CHEBI:
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{{#set: common name=v-type_proton_atpase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57326 57326]
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{{#set: common name=ORF}}
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* METABOLIGHTS : MTBLC57326
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{{#set: common name=vacuolar_h+-_sector_c}}
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* PUBCHEM:
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{{#set: common name=v-type_proton_atpase_catalytic_subunit_a}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266560 45266560]
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{{#set: common name=vacuolar_h+-atpase_v0_subunits_a}}
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* BIGG : mmcoa__R
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{{#set: common name=atp_synthase_gamma_chloroplastic}}
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{{#set: smiles=CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O}}
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{{#set: common name=atp_synthase_gamma_subunit}}
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{{#set: inchi key=InChIKey=MZFOKIKEPGUZEN-AGCMQPJKSA-I}}
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{{#set: common name=atp_synthase_subunit_mitochondrial}}
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{{#set: common name=(R)-methylmalonyl-CoA}}
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{{#set: common name=ycf35}}
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{{#set: molecular weight=862.568    }}
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{{#set: common name=atp_synthase_delta_mitochondrial}}
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{{#set: common name=L-methylmalonyl-CoA|methylmalonyl-CoA|methyl-malonyl-coenzyme A|CH3-malonyl-CoA}}
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{{#set: common name=v-type_proton_atpase_subunit_h}}
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{{#set: consumed or produced by=METHYLMALONYL-COA-MUT-RXN}}
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{{#set: common name=v-type_protonatpasesubunitd1}}
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{{#set: ec number=EC-3.6.3.14}}
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−
{{#set: gene associated=Tiso_gene_11754|Tiso_gene_9460|Tiso_gene_12618|Tiso_gene_18105|Tiso_gene_11192|Tiso_gene_5307|Tiso_gene_15850|Tiso_gene_1366|Tiso_gene_7213|Tiso_gene_10981|Tiso_gene_2798|Tiso_gene_1365|Tiso_gene_17383|Tiso_gene_7215|Tiso_gene_11753|Tiso_gene_11155|Tiso_gene_6012|Tiso_gene_6592}}
+
−
{{#set: in pathway=PWY-7219}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=esiliculosus}}
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−
{{#set: reconstruction category=manual}}
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−
{{#set: reconstruction source=primary_network}}
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−
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 17:32, 10 January 2018

Metabolite METHYL-MALONYL-COA

  • smiles:
    • CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O
  • inchi key:
    • InChIKey=MZFOKIKEPGUZEN-AGCMQPJKSA-I
  • common name:
    • (R)-methylmalonyl-CoA
  • molecular weight:
    • 862.568
  • Synonym(s):
    • L-methylmalonyl-CoA
    • methylmalonyl-CoA
    • methyl-malonyl-coenzyme A
    • CH3-malonyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C([O-])=O" cannot be used as a page name in this wiki.



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