Difference between revisions of "RXN-14280"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNONDEHYDRAT-RXN MANNONDEHYDRAT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** mannonate...")
 
(Created page with "Category:Gene == Gene Tiso_gene_7799 == * left end position: ** 8299 * transcription direction: ** NEGATIVE * right end position: ** 10650 * centisome position: ** 76.8283...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MANNONDEHYDRAT-RXN MANNONDEHYDRAT-RXN] ==
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== Gene Tiso_gene_7799 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 8299
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* common name:
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* transcription direction:
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** mannonate_dehydratase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/4.2.1.8 EC-4.2.1.8]
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** 10650
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* centisome position:
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** 76.82837   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ALDEHYDE-REDUCTASE-RXN]]
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** 1 [[D-MANNONATE]][c] '''=>''' 1 [[2-DEHYDRO-3-DEOXY-D-GLUCONATE]][c] '''+''' 1 [[WATER]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 D-mannonate[c] '''=>''' 1 2-dehydro-3-deoxy-D-gluconate[c] '''+''' 1 H2O[c]
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* [[RXN-12078]]
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** in-silico_annotation
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== Genes associated with this reaction  ==
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***automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-14102]]
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* [[Tiso_gene_8331]]
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** in-silico_annotation
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** IN-SILICO_ANNOTATION
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***automated-name-match
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***EC-NUMBER
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* [[RXN-8772]]
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== Pathways  ==
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** in-silico_annotation
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* [[PWY-7242]], D-fructuronate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7242 PWY-7242]
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***automated-name-match
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[RXN-8773]]
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== Reconstruction information  ==
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** in-silico_annotation
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* [[annotation]]:
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***automated-name-match
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** [[pathwaytools]]:
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== Pathways associated ==
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*** [[in-silico_annotation]]
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* [[PWY-5515]]
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* [[PWY-5516]]
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* [[PWY-6693]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=8299}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20097 20097]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=10650}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05606 R05606]
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{{#set: centisome position=76.82837    }}
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* UNIPROT:
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{{#set: reaction associated=ALDEHYDE-REDUCTASE-RXN|RXN-12078|RXN-14102|RXN-8772|RXN-8773}}
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** [http://www.uniprot.org/uniprot/P44488 P44488]
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{{#set: pathway associated=PWY-5515|PWY-5516|PWY-6693}}
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** [http://www.uniprot.org/uniprot/Q9CF50 Q9CF50]
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** [http://www.uniprot.org/uniprot/P24215 P24215]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=mannonate_dehydratase}}
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{{#set: ec number=EC-4.2.1.8}}
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{{#set: gene associated=Tiso_gene_8331}}
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{{#set: in pathway=PWY-7242}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:36, 10 January 2018

Gene Tiso_gene_7799

  • left end position:
    • 8299
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 10650
  • centisome position:
    • 76.82837
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14280&oldid=18642"