Difference between revisions of "HOMOCYSMETB12-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-715 RXN-715] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
 
(Created page with "Category:Gene == Gene Tiso_gene_16113 == * left end position: ** 3574 * transcription direction: ** POSITIVE * right end position: ** 5154 * centisome position: ** 48.1217...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-715 RXN-715] ==
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== Gene Tiso_gene_16113 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3574
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.13 EC-1.14.13]
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** POSITIVE
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* right end position:
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** 5154
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* centisome position:
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** 48.12172   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[ACYLCOADEHYDROG-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-713]][c] '''=>''' 1 [[CPD-714]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
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** in-silico_annotation
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* With common name(s):
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***automated-name-match
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** 1 oxygen[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 6-oxocampestanol[c] '''=>''' 1 cathasterone[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3577]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_8263]]
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* [[BCor]]
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** [[pantograph]]-[[creinhardtii]]
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* [[IVCDH]]
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** [[pantograph]]-[[creinhardtii]]
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* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[MCDH]]
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* [[PWY-699]], brassinosteroid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-699 PWY-699]
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** [[pantograph]]-[[creinhardtii]]
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** '''11''' reactions found over '''25''' reactions in the full pathway
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* [[MCDH_2mb2coa]]
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== Reconstruction information  ==
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** [[pantograph]]-[[creinhardtii]]
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* [[orthology]]:
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* [[RXN-17775]]
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** [[pantograph]]:
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** in-silico_annotation
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*** [[esiliculosus]]
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***automated-name-match
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* [[RXN-17779]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17783]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17784]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17788]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17792]]
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** in-silico_annotation
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***automated-name-match
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* [[RXN-17796]]
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** in-silico_annotation
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***automated-name-match
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== Pathways associated ==
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* [[FAO-PWY]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3574}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07430 R07430]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5154}}
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{{#set: ec number=EC-1.14.13}}
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{{#set: centisome position=48.12172    }}
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{{#set: gene associated=Tiso_gene_3577|Tiso_gene_8263}}
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{{#set: reaction associated=ACYLCOADEHYDROG-RXN|BCor|IVCDH|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|MCDH|MCDH_2mb2coa|RXN-17775|RXN-17779|RXN-17783|RXN-17784|RXN-17788|RXN-17792|RXN-17796}}
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{{#set: in pathway=PWY-699}}
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{{#set: pathway associated=FAO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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Revision as of 18:36, 10 January 2018

Gene Tiso_gene_16113

  • left end position:
    • 3574
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5154
  • centisome position:
    • 48.12172
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=HOMOCYSMETB12-RXN&oldid=18663"