Difference between revisions of "Alpha-D-Galactosides"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphatidate_c...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2337 == * left end position: ** 1085 * transcription direction: ** POSITIVE * right end position: ** 2648 * centisome position: ** 5.484507...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CDPDIGLYSYN-RXN CDPDIGLYSYN-RXN] ==
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== Gene Tiso_gene_2337 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1085
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* common name:
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* transcription direction:
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** phosphatidate_cytidylyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.7.41 EC-2.7.7.41]
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** 2648
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* centisome position:
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** 5.484507   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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** 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CTP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CDPDIACYLGLYCEROL]][c]
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** in-silico_annotation
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* With common name(s):
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***ec-number
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** 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c] '''+''' 1 H+[c] '''+''' 1 CTP[c] '''=>''' 1 diphosphate[c] '''+''' 1 a CDP-diacylglycerol[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_3522]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_2311]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_3523]]
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** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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== Pathways associated ==
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* [[PWY-7817]], type I lipoteichoic acid biosynthesis (S. aureus): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7817 PWY-7817]
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* [[GLUTAMATE-DEG1-PWY]]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-6728]]
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* [[PWY-5667]], CDP-diacylglycerol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5667 PWY-5667]
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* [[P162-PWY]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5022]]
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* [[PWY0-1319]], CDP-diacylglycerol biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1319 PWY0-1319]
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* [[ALACAT2-PWY]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7126]]
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* [[PWY-5981]], CDP-diacylglycerol biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5981 PWY-5981]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1085}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16229 16229]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2648}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01799 R01799]
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{{#set: centisome position=5.484507    }}
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* UNIPROT:
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{{#set: reaction associated=GLUTAMATE-DEHYDROGENASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JX34 Q9JX34]
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{{#set: pathway associated=GLUTAMATE-DEG1-PWY|PWY-6728|P162-PWY|PWY-5022|ALACAT2-PWY|PWY-7126}}
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** [http://www.uniprot.org/uniprot/Q9PMV2 Q9PMV2]
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** [http://www.uniprot.org/uniprot/Q59640 Q59640]
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** [http://www.uniprot.org/uniprot/P73548 P73548]
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** [http://www.uniprot.org/uniprot/P0ABG1 P0ABG1]
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** [http://www.uniprot.org/uniprot/O04940 O04940]
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** [http://www.uniprot.org/uniprot/Q49433 Q49433]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphatidate_cytidylyltransferase}}
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{{#set: ec number=EC-2.7.7.41}}
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{{#set: gene associated=Tiso_gene_3522|Tiso_gene_2311|Tiso_gene_3523}}
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{{#set: in pathway=PWY-7817|PWY-5667|PWY0-1319|PWY-5981}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 18:38, 10 January 2018

Gene Tiso_gene_2337

  • left end position:
    • 1085
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2648
  • centisome position:
    • 5.484507
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Alpha-D-Galactosides&oldid=18745"