Difference between revisions of "THIAMIN-TRIPHOSPHATASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-128 CPD1F-128] == * smiles: ** C=C1(C4(CC3(C1)(CC[CH]2(C(C)(C)CCCC(C)2[CH]3CC4)))) * inch...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPREDUCT-RXN GDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diph...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD1F-128 CPD1F-128] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDPREDUCT-RXN GDPREDUCT-RXN] ==
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* smiles:
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* direction:
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** C=C1(C4(CC3(C1)(CC[CH]2(C(C)(C)CCCC(C)2[CH]3CC4))))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=ONVABDHFQKWOSV-HPUSYDDDSA-N
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* common name:
 
* common name:
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** ent-kaurene
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** ribonucleoside-diphosphate_reductase
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* molecular weight:
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* ec number:
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** 272.473   
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** [http://enzyme.expasy.org/EC/1.17.4.1 EC-1.17.4.1]
 
* Synonym(s):
 
* Synonym(s):
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** ent-kaur-16-ene
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[1.14.13.78-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Red-Thioredoxin]][c] '''+''' 1 [[GDP]][c] '''=>''' 1 [[DGDP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[Ox-Thioredoxin]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 a reduced thioredoxin[c] '''+''' 1 GDP[c] '''=>''' 1 dGDP[c] '''+''' 1 H2O[c] '''+''' 1 an oxidized thioredoxin[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_9915]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10138]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_9916]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10617]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY-7222]], guanosine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7226]], guanosine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7226 PWY-7226]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
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* LIPID_MAPS : LMPR0104130002
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28030 28030]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=11966109 11966109]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R02019 R02019]
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** [http://www.chemspider.com/Chemical-Structure.16737395.html 16737395]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: common name=ribonucleoside-diphosphate_reductase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15415 15415]
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{{#set: ec number=EC-1.17.4.1}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_9915|Tiso_gene_10138|Tiso_gene_9916|Tiso_gene_10617}}
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** [http://www.genome.jp/dbget-bin/www_bget?C06090 C06090]
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{{#set: in pathway=PWY-7222|PWY-7226}}
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{{#set: smiles=C=C1(C4(CC3(C1)(CC[CH]2(C(C)(C)CCCC(C)2[CH]3CC4))))}}
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{{#set: reconstruction category=orthology}}
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{{#set: inchi key=InChIKey=ONVABDHFQKWOSV-HPUSYDDDSA-N}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: common name=ent-kaurene}}
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{{#set: reconstruction source=synechocystis|athaliana|esiliculosus}}
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{{#set: molecular weight=272.473    }}
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{{#set: reconstruction category=manual}}
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{{#set: common name=ent-kaur-16-ene}}
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{{#set: reconstruction source=primary_network}}
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{{#set: consumed by=1.14.13.78-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}

Revision as of 18:39, 10 January 2018

Reaction GDPREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonucleoside-diphosphate_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a reduced thioredoxin[c] + 1 GDP[c] => 1 dGDP[c] + 1 H2O[c] + 1 an oxidized thioredoxin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7222, guanosine deoxyribonucleotides de novo biosynthesis II: PWY-7222
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7226, guanosine deoxyribonucleotides de novo biosynthesis I: PWY-7226
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links







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