Difference between revisions of "3.2.1.25-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGLUCOSAMACYLTRANS-RXN UDPNACETYLGLUCOSAMACYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5-DEHYDROGENASE-RXN SHIKIMATE-5-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGLUCOSAMACYLTRANS-RXN UDPNACETYLGLUCOSAMACYLTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5-DEHYDROGENASE-RXN SHIKIMATE-5-DEHYDROGENASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acyl---udp-n-acetylglucosamine_acyltransferase
+
** pentafunctional_protein
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.129 EC-2.3.1.129]
+
** [http://enzyme.expasy.org/EC/1.1.1.25 EC-1.1.1.25]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[R-3-hydroxymyristoyl-ACPs]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[UDP-OHMYR-ACETYLGLUCOSAMINE]][c] '''+''' 1 [[ACP]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-DEHYDRO-SHIKIMATE]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[SHIKIMATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxymyristoyl-[acp][c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-α-D-glucosamine[c] '''+''' 1 a holo-[acyl-carrier protein][c]
+
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 3-dehydroshikimate[c] '''=>''' 1 NADP+[c] '''+''' 1 shikimate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19198]]
+
* [[Tiso_gene_5753]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_5752]]
 
** IN-SILICO_ANNOTATION
 
** IN-SILICO_ANNOTATION
 
***EC-NUMBER
 
***EC-NUMBER
−
** [[pantograph]]-[[synechocystis]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[NAGLIPASYN-PWY]], lipid IVA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY]
+
* [[PWY-6163]], chorismate biosynthesis from 3-dehydroquinate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6163 PWY-6163]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[synechocystis]]
+
*** [[esiliculosus]]
 +
* [[manual]]:
 +
** [[primary_network]]
 
* [[annotation]]:
 
* [[annotation]]:
 
** [[pathwaytools]]:
 
** [[pathwaytools]]:
 
*** [[in-silico_annotation]]
 
*** [[in-silico_annotation]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17737 17737]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04567 R04567]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02413 R02413]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PIM1 Q9PIM1]
+
** [http://www.uniprot.org/uniprot/P07547 P07547]
−
** [http://www.uniprot.org/uniprot/Q9JX26 Q9JX26]
+
** [http://www.uniprot.org/uniprot/P08566 P08566]
−
** [http://www.uniprot.org/uniprot/P43887 P43887]
+
** [http://www.uniprot.org/uniprot/Q58484 Q58484]
−
** [http://www.uniprot.org/uniprot/P32200 P32200]
+
** [http://www.uniprot.org/uniprot/Q9PIA0 Q9PIA0]
−
** [http://www.uniprot.org/uniprot/P32201 P32201]
+
** [http://www.uniprot.org/uniprot/P0A6D5 P0A6D5]
−
** [http://www.uniprot.org/uniprot/P0A722 P0A722]
+
** [http://www.uniprot.org/uniprot/Q9CES7 Q9CES7]
 +
** [http://www.uniprot.org/uniprot/Q44606 Q44606]
 +
** [http://www.uniprot.org/uniprot/Q44608 Q44608]
 +
** [http://www.uniprot.org/uniprot/Q44609 Q44609]
 +
** [http://www.uniprot.org/uniprot/Q44610 Q44610]
 +
** [http://www.uniprot.org/uniprot/Q44611 Q44611]
 +
** [http://www.uniprot.org/uniprot/Q44612 Q44612]
 +
** [http://www.uniprot.org/uniprot/P15770 P15770]
 +
** [http://www.uniprot.org/uniprot/Q42947 Q42947]
 +
** [http://www.uniprot.org/uniprot/O65917 O65917]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acyl---udp-n-acetylglucosamine_acyltransferase}}
+
{{#set: common name=pentafunctional_protein}}
−
{{#set: ec number=EC-2.3.1.129}}
+
{{#set: ec number=EC-1.1.1.25}}
−
{{#set: gene associated=Tiso_gene_19198}}
+
{{#set: gene associated=Tiso_gene_5753|Tiso_gene_5752}}
−
{{#set: in pathway=NAGLIPASYN-PWY}}
+
{{#set: in pathway=PWY-6163}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=synechocystis}}
+
{{#set: reconstruction source=esiliculosus}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=primary_network}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=in-silico_annotation}}
 
{{#set: reconstruction source=in-silico_annotation}}

Revision as of 17:40, 10 January 2018

Reaction SHIKIMATE-5-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pentafunctional_protein
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6163, chorismate biosynthesis from 3-dehydroquinate: PWY-6163
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links







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