Difference between revisions of "TAURINE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14037 RXN-14037] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ide...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNPOXI-RXN PNPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine_5_-phosphate...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14037 RXN-14037] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PNPOXI-RXN PNPOXI-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** pyridoxamine_5_-phosphate_oxidase-related_fmn-binding
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-ACETO-LACTATE]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''<=>''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c] '''+''' 1 [[PYRUVATE]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PYRIDOXINE-5P]][c] '''=>''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (S)-2-acetolactate[c] '''+''' 1 thiamine diphosphate[c] '''<=>''' 1 2-(&alpha;-hydroxyethyl)thiamine diphosphate[c] '''+''' 1 pyruvate[c]
+
** 1 oxygen[c] '''+''' 1 pyridoxine 5'-phosphate[c] '''=>''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 hydrogen peroxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_11362]]
+
* [[Tiso_gene_1471]]
−
** [[pantograph]]-[[athaliana]]
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** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[athaliana]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24808 24808]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15149 15149]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04672 R04672]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00278 R00278]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: gene associated=Tiso_gene_11362}}
+
{{#set: common name=pyridoxamine_5_-phosphate_oxidase-related_fmn-binding}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-1.4.3.5}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_1471}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-7204|PWY-7282|PLPSAL-PWY|PYRIDOXSYN-PWY}}
−
{{#set: reconstruction source=athaliana}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:52, 18 March 2018

Reaction PNPOXI-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyridoxamine_5_-phosphate_oxidase-related_fmn-binding
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
    • 6 reactions found over 9 reactions in the full pathway
  • PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PYRIDOXSYN-PWY, pyridoxal 5'-phosphate biosynthesis I: PYRIDOXSYN-PWY
    • 3 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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