Difference between revisions of "Tiso gene 11753"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-602 RXN-602] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1.14...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-602 RXN-602] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
−
* ec number:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
−
** [http://enzyme.expasy.org/EC/1.14.11.19 EC-1.14.11.19]
+
* common name:
 +
** 5-aminoimidazole ribonucleotide biosynthesis II
 
* Synonym(s):
 
* Synonym(s):
−
** Leucoanthocyanidin dioxygenase
 
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''4''' reactions found over '''5''' reactions in the full pathway
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-590]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[CPD-591]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[SUC]][c]
+
* [[AIRS-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 oxygen[c] '''+''' 1 (2R,3S,4S)-leucocyanidin[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 cyanidin[c] '''+''' 1 H+[c] '''+''' 1 CO2[c] '''+''' 2 H2O[c] '''+''' 1 succinate[c]
+
*** [[Tiso_gene_1369]]
−
 
+
** 4 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-in-silico_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[manual-primary_network]]
−
* [[Tiso_gene_3330]]
+
*** [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[athaliana]]
+
*** [[orthology-synechocystis]]
−
** [[pantograph]]-[[esiliculosus]]
+
* [[FGAMSYN-RXN]]
−
== Pathways  ==
+
** 1 associated gene(s):
−
== Reconstruction information  ==
+
*** [[Tiso_gene_5865]]
−
* [[orthology]]:
+
** 4 reconstruction source(s) associated:
−
** [[pantograph]]:
+
*** [[annotation-in-silico_annotation]]
−
*** [[esiliculosus]]
+
*** [[orthology-athaliana]]
−
*** [[athaliana]]
+
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
* [[GLYRIBONUCSYN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_1369]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PRPPAMIDOTRANS-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_1007]]
 +
*** [[Tiso_gene_9914]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=GARTRANSFORMYL2-RXN GARTRANSFORMYL2-RXN]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* ECOCYC:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05036 R05036]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6122 PWY-6122]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: ec number=EC-1.14.11.19}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=Leucoanthocyanidin dioxygenase}}
+
{{#set: common name=5-aminoimidazole ribonucleotide biosynthesis II}}
−
{{#set: gene associated=Tiso_gene_3330}}
+
{{#set: reaction found=4}}
−
{{#set: in pathway=}}
+
{{#set: total reaction=5}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: completion rate=80.0}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus|athaliana}}
+

Revision as of 18:54, 18 March 2018

Pathway PWY-6122

  • taxonomic range:
  • common name:
    • 5-aminoimidazole ribonucleotide biosynthesis II
  • Synonym(s):

Reaction(s) found

4 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11753&oldid=20555"