Difference between revisions of "CPD-1081"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9651 RXN-9651] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-oxoa...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9651 RXN-9651] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** fatty acid α-oxidation II
+
** polyketide_synthase
 +
** 3-oxoacyl-synthase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''4''' reactions found over '''6''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN66-469]]
+
** 1 [[MALONYL-COA]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-decanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
−
* [[RXN66-470]]
+
* With common name(s):
−
* [[RXN66-472]]
+
** 1 malonyl-CoA[c] '''+''' 1 an octanoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a 3-oxo-decanoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c]
−
* [[RXN66-483]]
+
 
−
== Reaction(s) not found ==
+
== Genes associated with this reaction  ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=FORMYL-COA-HYDROLASE-RXN FORMYL-COA-HYDROLASE-RXN]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-471 RXN66-471]
+
* [[Tiso_gene_14485]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_19302]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_135]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_136]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_500]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_15991]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_13394]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_10876]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5939]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33208}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=fatty acid α-oxidation II}}
+
{{#set: common name=polyketide_synthase}}
−
{{#set: reaction found=4}}
+
{{#set: common name=3-oxoacyl-synthase}}
−
{{#set: reaction not found=6}}
+
{{#set: ec number=EC-2.3.1.86}}
−
{{#set: completion rate=67.0}}
+
{{#set: ec number=EC-2.3.1.85}}
 +
{{#set: ec number=EC-2.3.1.41}}
 +
{{#set: gene associated=Tiso_gene_14485|Tiso_gene_19302|Tiso_gene_135|Tiso_gene_136|Tiso_gene_500|Tiso_gene_15991|Tiso_gene_13394|Tiso_gene_10876|Tiso_gene_5939}}
 +
{{#set: in pathway=PWY-5994}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:55, 18 March 2018

Reaction RXN-9651

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-1081&oldid=20693"