Difference between revisions of "CPD-17640"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-167 RXN1F-167] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-167 RXN1F-167] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
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** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3035 TAX-3035]
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* ec number:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
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* common name:
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** TCA cycle IV (2-oxoglutarate decarboxylase)
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* Synonym(s):
 
* Synonym(s):
** citric acid cycle
 
** tricarboxylic acid cycle
 
** Szent-Gyorgyi-Krebs cycle
 
** Krebs cycle
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''9''' reactions found over '''11''' reactions in the full pathway
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* With identifiers:
* [[ACONITATEDEHYDR-RXN]]
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** 1 [[CPD-695]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CPD-10332]][c]
* [[ACONITATEHYDR-RXN]]
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* With common name(s):
* [[CITSYN-RXN]]
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** 1 gibberellin A53[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 succinate[c] '''+''' 1 gibberellin44 (open lactone form)[c]
* [[FUMHYDR-RXN]]
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* [[ISOCIT-CLEAV-RXN]]
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== Genes associated with this reaction  ==
* [[ISOCITDEH-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
* [[MALATE-DEH-RXN]]
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* [[Tiso_gene_3330]]
* [[MALSYN-RXN]]
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** [[pantograph]]-[[athaliana]]
* [[SUCCSEMIALDDEHYDROG-RXN]]
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** [[pantograph]]-[[esiliculosus]]
== Reaction(s) not found ==
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== Pathways  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
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* [[PWY-5035]], gibberellin biosynthesis III (early C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7774 RXN-7774]
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** '''3''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-1117}}
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* LIGAND-RXN:
{{#set: taxonomic range=TAX-3035}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05097 R05097]
{{#set: taxonomic range=TAX-1224}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: taxonomic range=TAX-201174}}
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{{#set: ec number=EC-1.14.11}}
{{#set: common name=TCA cycle IV (2-oxoglutarate decarboxylase)}}
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{{#set: gene associated=Tiso_gene_3330}}
{{#set: common name=citric acid cycle|tricarboxylic acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
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{{#set: in pathway=PWY-5035}}
{{#set: reaction found=9}}
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{{#set: reconstruction category=orthology}}
{{#set: reaction not found=11}}
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{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
{{#set: completion rate=82.0}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 17:55, 18 March 2018

Reaction RXN1F-167

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5035, gibberellin biosynthesis III (early C-13 hydroxylation): PWY-5035
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links