Difference between revisions of "Tiso gene 2717"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] == * direction: ** LEFT-TO-RIGHT * common name: ** proline_dehydrogenase * ec...")
(Created page with "Category:Gene == Gene Tiso_gene_2108 == * left end position: ** 27990 * transcription direction: ** POSITIVE * right end position: ** 30232 * centisome position: ** 92.584...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14903 RXN-14903] ==
+
== Gene Tiso_gene_2108 ==
* direction:
+
* left end position:
** LEFT-TO-RIGHT
+
** 27990
* common name:
+
* transcription direction:
** proline_dehydrogenase
+
** POSITIVE
* ec number:
+
* right end position:
** [http://enzyme.expasy.org/EC/1.5.5.2 EC-1.5.5.2]
+
** 30232
 +
* centisome position:
 +
** 92.58402   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reactions associated ==
* With identifiers:
+
* [[RXN-12086]]
** 1 [[PRO]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[L-DELTA1-PYRROLINE_5-CARBOXYLATE]][c] '''+''' 1 [[ETR-Quinols]][c] '''+''' 1 [[PROTON]][c]
+
** in-silico_annotation
* With common name(s):
+
***ec-number
** 1 L-proline[c] '''+''' 1 an electron-transfer quinone[c] '''=>''' 1 (S)-1-pyrroline-5-carboxylate[c] '''+''' 1 an electron-transfer quinol[c] '''+''' 1 H+[c]
+
* [[RXN-12579]]
 
+
** in-silico_annotation
== Genes associated with this reaction  ==
+
***ec-number
Genes have been associated with this reaction based on different elements listed below.
+
* [[TRIACYLGLYCEROL-LIPASE-RXN]]
* [[Tiso_gene_18825]]
+
** in-silico_annotation
** IN-SILICO_ANNOTATION
+
***ec-number
***EC-NUMBER
+
== Pathways associated ==
* [[Tiso_gene_18826]]
+
* [[LIPAS-PWY]]
** IN-SILICO_ANNOTATION
+
* [[PWY-6857]]
***EC-NUMBER
+
* [[Tiso_gene_9762]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
+
== Pathways ==
+
* [[PROUT-PWY]], L-proline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-5737]], (5R)-carbapenem carboxylate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5737 PWY-5737]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
+
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[esiliculosus]]
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: left end position=27990}}
** [http://www.genome.jp/dbget-bin/www_bget?R01253 R01253]
+
{{#set: transcription direction=POSITIVE}}
* UNIPROT:
+
{{#set: right end position=30232}}
** [http://www.uniprot.org/uniprot/P95629 P95629]
+
{{#set: centisome position=92.58402    }}
** [http://www.uniprot.org/uniprot/Q59206 Q59206]
+
{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
** [http://www.uniprot.org/uniprot/P74275 P74275]
+
{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
** [http://www.uniprot.org/uniprot/P10503 P10503]
+
** [http://www.uniprot.org/uniprot/Q51873 Q51873]
+
** [http://www.uniprot.org/uniprot/Q59426 Q59426]
+
** [http://www.uniprot.org/uniprot/O24897 O24897]
+
** [http://www.uniprot.org/uniprot/Q9K0Z9 Q9K0Z9]
+
** [http://www.uniprot.org/uniprot/Q9JSY1 Q9JSY1]
+
** [http://www.uniprot.org/uniprot/P09546 P09546]
+
** [http://www.uniprot.org/uniprot/Q9PMG0 Q9PMG0]
+
** [http://www.uniprot.org/uniprot/Q9ZN12 Q9ZN12]
+
** [http://www.uniprot.org/uniprot/Q04499 Q04499]
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=proline_dehydrogenase}}
+
{{#set: ec number=EC-1.5.5.2}}
+
{{#set: gene associated=Tiso_gene_18825|Tiso_gene_18826|Tiso_gene_9762}}
+
{{#set: in pathway=PROUT-PWY|PWY-6922|PWY-5737|CITRULBIO-PWY}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=esiliculosus}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 18:58, 18 March 2018

Gene Tiso_gene_2108

  • left end position:
    • 27990
  • transcription direction:
    • POSITIVE
  • right end position:
    • 30232
  • centisome position:
    • 92.58402
  • Synonym(s):

Reactions associated

Pathways associated

External links