Difference between revisions of "FAD"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12726 RXN-12726] == * direction: ** LEFT-TO-RIGHT * common name: ** cog0031:_cysteine_synthase...")
(Created page with "Category:Gene == Gene Tiso_gene_7173 == * left end position: ** 9938 * transcription direction: ** POSITIVE * right end position: ** 11222 * centisome position: ** 86.9238...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12726 RXN-12726] ==
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== Gene Tiso_gene_7173 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 9938
* common name:
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* transcription direction:
** cog0031:_cysteine_synthase
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** POSITIVE
** cysteine_synthase
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* right end position:
** cysteine
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** 11222
* ec number:
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* centisome position:
** [http://enzyme.expasy.org/EC/2.5.1.47 EC-2.5.1.47]
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** 86.92382   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[MRNA-GUANYLYLTRANSFERASE-RXN]]
** 1 [[CPD-678]][c] '''+''' 1 [[ACETYLSERINE]][c] '''=>''' 1 [[ACET]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-SELENOCYSTEINE]][c]
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** in-silico_annotation
* With common name(s):
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***ec-number
** 1 hydrogen selenide[c] '''+''' 1 O-acetyl-L-serine[c] '''=>''' 1 acetate[c] '''+''' 1 H+[c] '''+''' 1 L-selenocysteine[c]
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== Pathways associated ==
 
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* [[PWY-7375]]
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_7852]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_17043]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_819]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6110]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_2283]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_12184]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-6936]], seleno-amino acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6936 PWY-6936]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[esiliculosus]]
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*** [[athaliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=9938}}
{{#set: common name=cog0031:_cysteine_synthase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=cysteine_synthase}}
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{{#set: right end position=11222}}
{{#set: common name=cysteine}}
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{{#set: centisome position=86.92382    }}
{{#set: ec number=EC-2.5.1.47}}
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{{#set: reaction associated=MRNA-GUANYLYLTRANSFERASE-RXN}}
{{#set: gene associated=Tiso_gene_7852|Tiso_gene_17043|Tiso_gene_819|Tiso_gene_6110|Tiso_gene_2283|Tiso_gene_12184}}
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{{#set: pathway associated=PWY-7375}}
{{#set: in pathway=PWY-6936}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:59, 18 March 2018

Gene Tiso_gene_7173

  • left end position:
    • 9938
  • transcription direction:
    • POSITIVE
  • right end position:
    • 11222
  • centisome position:
    • 86.92382
  • Synonym(s):

Reactions associated

Pathways associated

External links