Difference between revisions of "Tiso gene 7173"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMATETHFLIG-RXN FORMATETHFLIG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzym...")
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6405 PWY-6405] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMATETHFLIG-RXN FORMATETHFLIG-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-8782 TAX-8782]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
+
* ec number:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33083 TAX-33083]
+
** [http://enzyme.expasy.org/EC/6.3.4.3 EC-6.3.4.3]
−
* common name:
+
−
** Rapoport-Luebering glycolytic shunt
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
  '''1''' reactions found over '''3''' reactions in the full pathway
+
* With identifiers:
−
* [[RXN-15511]]
+
** 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[THF-GLU-N]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c]
−
== Reaction(s) not found ==
+
* With common name(s):
−
* [http://metacyc.org/META/NEW-IMAGE?object=BISPHOSPHOGLYCERATE-MUTASE-RXN BISPHOSPHOGLYCERATE-MUTASE-RXN]
+
** 1 ATP[c] '''+''' 1 formate[c] '''+''' 1 a tetrahydrofolate[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11102 RXN-11102]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_432]]
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_7582]]
 +
** EXPERIMENTAL_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
== Pathways ==
 +
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 +
** '''7''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
 +
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-8782}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-40674}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20221 20221]
−
{{#set: taxonomic range=TAX-33083}}
+
* LIGAND-RXN:
−
{{#set: common name=Rapoport-Luebering glycolytic shunt}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00943 R00943]
−
{{#set: reaction found=1}}
+
* UNIPROT:
−
{{#set: reaction not found=3}}
+
** [http://www.uniprot.org/uniprot/P09440 P09440]
−
{{#set: completion rate=33.0}}
+
** [http://www.uniprot.org/uniprot/P13419 P13419]
 +
** [http://www.uniprot.org/uniprot/P07245 P07245]
 +
** [http://www.uniprot.org/uniprot/P11586 P11586]
 +
** [http://www.uniprot.org/uniprot/P21164 P21164]
 +
** [http://www.uniprot.org/uniprot/P28723 P28723]
 +
** [http://www.uniprot.org/uniprot/Q9JVY8 Q9JVY8]
 +
** [http://www.uniprot.org/uniprot/Q9CH07 Q9CH07]
 +
** [http://www.uniprot.org/uniprot/Q07064 Q07064]
 +
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-6.3.4.3}}
 +
{{#set: gene associated=Tiso_gene_432|Tiso_gene_7582}}
 +
{{#set: in pathway=PWY-2201|PWY-1722|PWY-3841|CODH-PWY|PWY-2161}}
 +
{{#set: reconstruction category=orthology|manual|annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 17:59, 18 March 2018

Reaction FORMATETHFLIG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 formate[c] + 1 a tetrahydrofolate[c] => 1 phosphate[c] + 1 ADP[c] + 1 an N10-formyl-tetrahydrofolate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2201, folate transformations I: PWY-2201
    • 7 reactions found over 12 reactions in the full pathway
  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate: PWY-1722
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3841, folate transformations II: PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-2161, folate polyglutamylation: PWY-2161
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7173&oldid=21069"