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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMATETHFLIG-RXN FORMATETHFLIG-RXN] == | + | == Gene Tiso_gene_9263 == |
| − | * direction: | + | * left end position: |
| − | ** LEFT-TO-RIGHT | + | ** 8441 |
| − | * ec number: | + | * transcription direction: |
| − | ** [http://enzyme.expasy.org/EC/6.3.4.3 EC-6.3.4.3] | + | ** POSITIVE |
| | + | * right end position: |
| | + | ** 12428 |
| | + | * centisome position: |
| | + | ** 52.891785 |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * [[ATPASE-RXN]] |
| − | ** 1 [[ATP]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[THF-GLU-N]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[ADP]][c]
| + | ** in-silico_annotation |
| − | * With common name(s):
| + | ***ec-number |
| − | ** 1 ATP[c] '''+''' 1 formate[c] '''+''' 1 a tetrahydrofolate[c] '''=>''' 1 phosphate[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 ADP[c]
| + | == Pathways associated == |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_432]] | + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_7582]]
| + | |
| − | ** EXPERIMENTAL_ANNOTATION
| + | |
| − | ***EC-NUMBER
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
| + | |
| − | ** '''7''' reactions found over '''12''' reactions in the full pathway | + | |
| − | * [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
| + | |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway | + | |
| − | * [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161] | + | |
| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
| + | |
| − | * [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
| + | |
| − | ** '''5''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
| + | |
| − | ** '''9''' reactions found over '''11''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[esiliculosus]]
| + | |
| − | * [[manual]]:
| + | |
| − | ** [[primary_network]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[experimental_annotation]]
| + | |
| − | *** [[in-silico_annotation]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: left end position=8441}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20221 20221]
| + | {{#set: transcription direction=POSITIVE}} |
| − | * LIGAND-RXN:
| + | {{#set: right end position=12428}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00943 R00943]
| + | {{#set: centisome position=52.891785 }} |
| − | * UNIPROT:
| + | {{#set: reaction associated=ATPASE-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P09440 P09440]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P13419 P13419]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P07245 P07245]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P11586 P11586]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P21164 P21164]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P28723 P28723]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JVY8 Q9JVY8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CH07 Q9CH07]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q07064 Q07064]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q27772 Q27772]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: ec number=EC-6.3.4.3}} | + | |
| − | {{#set: gene associated=Tiso_gene_432|Tiso_gene_7582}} | + | |
| − | {{#set: in pathway=PWY-2201|PWY-1722|PWY-2161|CODH-PWY|PWY-3841}} | + | |
| − | {{#set: reconstruction category=orthology}} | + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=esiliculosus}}
| + | |
| − | {{#set: reconstruction category=manual}}
| + | |
| − | {{#set: reconstruction source=primary_network}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| + | |
