Difference between revisions of "RXN-11477"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF ** uropor...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6129 PWY-6129] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UROGENIIISYN-RXN UROGENIIISYN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6129 PWY-6129] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
* common name:
 
* common name:
** ORF
+
** dolichol and dolichyl phosphate biosynthesis
** uroporphyrinogen_synthase
+
* ec number:
+
** [http://enzyme.expasy.org/EC/4.2.1.75 EC-4.2.1.75]
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''1''' reactions found over '''4''' reactions in the full pathway
** 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[UROPORPHYRINOGEN-III]][c]
+
* [[DOLICHOL-KINASE-RXN]]
* With common name(s):
+
** 1 associated gene(s):
** 1 preuroporphyrinogen[c] '''=>''' 1 H2O[c] '''+''' 1 uroporphyrinogen-III[c]
+
*** [[Tiso_gene_8073]]
 
+
** 1 reconstruction source(s) associated:
== Genes associated with this reaction  ==
+
*** [[orthology-esiliculosus]]
Genes have been associated with this reaction based on different elements listed below.
+
== Reaction(s) not found ==
* [[Tiso_gene_18827]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9969 RXN-9969]
** IN-SILICO_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9970 RXN-9970]
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9971 RXN-9971]
* [[Tiso_gene_11630]]
+
** IN-SILICO_ANNOTATION
+
***EC-NUMBER
+
** [[pantograph]]-[[esiliculosus]]
+
** [[pantograph]]-[[creinhardtii]]
+
== Pathways  ==
+
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
+
** '''6''' reactions found over '''6''' reactions in the full pathway
+
== Reconstruction information  ==
+
* [[orthology]]:
+
** [[pantograph]]:
+
*** [[creinhardtii]]
+
*** [[esiliculosus]]
+
* [[manual]]:
+
** [[primary_network]]
+
* [[annotation]]:
+
** [[pathwaytools]]:
+
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: taxonomic range=TAX-2759}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
+
{{#set: common name=dolichol and dolichyl phosphate biosynthesis}}
* LIGAND-RXN:
+
{{#set: reaction found=1}}
** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
+
{{#set: total reaction=4}}
* UNIPROT:
+
{{#set: completion rate=25.0}}
** [http://www.uniprot.org/uniprot/P10746 P10746]
+
** [http://www.uniprot.org/uniprot/P51163 P51163]
+
** [http://www.uniprot.org/uniprot/P21248 P21248]
+
** [http://www.uniprot.org/uniprot/Q58401 Q58401]
+
** [http://www.uniprot.org/uniprot/P09126 P09126]
+
** [http://www.uniprot.org/uniprot/Q59294 Q59294]
+
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=ORF}}
+
{{#set: common name=uroporphyrinogen_synthase}}
+
{{#set: ec number=EC-4.2.1.75}}
+
{{#set: gene associated=Tiso_gene_18827|Tiso_gene_11630}}
+
{{#set: in pathway=PWY-5189|PWY-5188}}
+
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction source=primary_network}}
+
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=in-silico_annotation}}
+

Revision as of 19:00, 18 March 2018

Pathway PWY-6129

  • taxonomic range:
  • common name:
    • dolichol and dolichyl phosphate biosynthesis
  • Synonym(s):

Reaction(s) found

1 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links