Difference between revisions of "1.8.3.5-RXN"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3-Oxo-Delta-4-Steroids 3-Oxo-Delta-4-Steroids] == * common name: ** a 3-oxo-Δ4-steroid *...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phospho...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] == |
+ | * direction: | ||
+ | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** thymidine_phosphorylase |
+ | ** ORF | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.7.4.8 EC-2.7.4.8] | ||
* Synonym(s): | * Synonym(s): | ||
− | == Reaction(s) | + | == Reaction Formula == |
− | == | + | * With identifiers: |
− | == | + | ** 1 [[GMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[ADP]][c] |
− | * [[ | + | * With common name(s): |
− | * [[ | + | ** 1 GMP[c] '''+''' 1 ATP[c] '''=>''' 1 GDP[c] '''+''' 1 ADP[c] |
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * [[Tiso_gene_12554]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | * [[Tiso_gene_1011]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | * [[Tiso_gene_4560]] | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | * [[Tiso_gene_15049]] | ||
+ | ** IN-SILICO_ANNOTATION | ||
+ | ***EC-NUMBER | ||
+ | ** [[pantograph]]-[[athaliana]] | ||
+ | ** [[pantograph]]-[[synechocystis]] | ||
+ | ** [[pantograph]]-[[esiliculosus]] | ||
+ | == Pathways == | ||
+ | * [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221] | ||
+ | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-athaliana]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-synechocystis]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | ** Source: [[orthology-esiliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-primary_network]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-in-silico_annotation]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | {{#set: common name= | + | * RHEA: |
− | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780] |
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00332 R00332] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PNB8 Q9PNB8] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CEE3 Q9CEE3] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JT96 Q9JT96] | ||
+ | ** [http://www.uniprot.org/uniprot/P44310 P44310] | ||
+ | ** [http://www.uniprot.org/uniprot/P15454 P15454] | ||
+ | ** [http://www.uniprot.org/uniprot/P60546 P60546] | ||
+ | ** [http://www.uniprot.org/uniprot/P31006 P31006] | ||
+ | ** [http://www.uniprot.org/uniprot/P46195 P46195] | ||
+ | ** [http://www.uniprot.org/uniprot/Q16774 Q16774] | ||
+ | ** [http://www.uniprot.org/uniprot/P72648 P72648] | ||
+ | ** [http://www.uniprot.org/uniprot/Q6RHR9 Q6RHR9] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9M681 Q9M681] | ||
+ | {{#set: direction=LEFT-TO-RIGHT}} | ||
+ | {{#set: common name=thymidine_phosphorylase}} | ||
+ | {{#set: common name=ORF}} | ||
+ | {{#set: ec number=EC-2.7.4.8}} | ||
+ | {{#set: gene associated=Tiso_gene_12554|Tiso_gene_1011|Tiso_gene_4560|Tiso_gene_15049}} | ||
+ | {{#set: in pathway=PWY-7221}} | ||
+ | {{#set: reconstruction category=orthology|manual|annotation}} | ||
+ | {{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-athaliana|orthology-esiliculosus|orthology-synechocystis}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 18:00, 18 March 2018
Contents
Reaction GUANYL-KIN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- thymidine_phosphorylase
- ORF
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 GMP[c] + 1 ATP[c] => 1 GDP[c] + 1 ADP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Tiso_gene_12554
- IN-SILICO_ANNOTATION
- EC-NUMBER
- pantograph-athaliana
- pantograph-synechocystis
- IN-SILICO_ANNOTATION
- Tiso_gene_1011
- IN-SILICO_ANNOTATION
- EC-NUMBER
- IN-SILICO_ANNOTATION
- Tiso_gene_4560
- Tiso_gene_15049
- IN-SILICO_ANNOTATION
- EC-NUMBER
- pantograph-athaliana
- pantograph-synechocystis
- pantograph-esiliculosus
- IN-SILICO_ANNOTATION
Pathways
- PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
- 4 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-athaliana
- Tool: pantograph
- Source: orthology-synechocystis
- Tool: pantograph
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-athaliana
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: