Difference between revisions of "PWY-7269"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-634 CPD-634] == * smiles: ** CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC(=O)[CH]1(CC(O)C(O)...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-634 CPD-634] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATE-CARBOXYLASE-RXN PYRUVATE-CARBOXYLASE-RXN] ==
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* smiles:
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* direction:
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** CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC(=O)[CH]1(CC(O)C(O)CC(C)1[CH]2CCC(C)34))))
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=VYUIKSFYFRVQLF-YLNAYWRASA-N
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* common name:
 
* common name:
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** castasterone
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** ORF
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* molecular weight:
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** Pyruvate carboxylase
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** 464.684   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.4.1.1 EC-6.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-779]]
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** 1 [[HCO3]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[ADP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 hydrogencarbonate[c] '''+''' 1 pyruvate[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 phosphate[c] '''+''' 1 oxaloacetate[c] '''+''' 1 ADP[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15144]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_2812]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_15145]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142]
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** '''8''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-6146]], Methanobacterium thermoautotrophicum biosynthetic metabolism: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6146 PWY-6146]
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** '''7''' reactions found over '''16''' reactions in the full pathway
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* [[PWY-5750]], itaconate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5750 PWY-5750]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY]
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** '''4''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=133534 133534]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20844 20844]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=23051 23051]
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** [http://www.genome.jp/dbget-bin/www_bget?R00344 R00344]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C15794 C15794]
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** [http://www.uniprot.org/uniprot/Q05920 Q05920]
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{{#set: smiles=CC(C)C(C)C(O)C(O)C(C)[CH]3(CC[CH]4([CH]2(CC(=O)[CH]1(CC(O)C(O)CC(C)1[CH]2CCC(C)34))))}}
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** [http://www.uniprot.org/uniprot/Q9PNQ4 Q9PNQ4]
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{{#set: inchi key=InChIKey=VYUIKSFYFRVQLF-YLNAYWRASA-N}}
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** [http://www.uniprot.org/uniprot/P95127 P95127]
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{{#set: common name=castasterone}}
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** [http://www.uniprot.org/uniprot/Q9PP00 Q9PP00]
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{{#set: molecular weight=464.684    }}
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** [http://www.uniprot.org/uniprot/Q9CHQ7 Q9CHQ7]
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{{#set: produced by=RXN-779}}
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** [http://www.uniprot.org/uniprot/Q9KWU4 Q9KWU4]
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** [http://www.uniprot.org/uniprot/P11498 P11498]
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** [http://www.uniprot.org/uniprot/P52873 P52873]
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** [http://www.uniprot.org/uniprot/P11154 P11154]
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** [http://www.uniprot.org/uniprot/P32327 P32327]
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** [http://www.uniprot.org/uniprot/O17732 O17732]
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** [http://www.uniprot.org/uniprot/Q9UUE1 Q9UUE1]
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** [http://www.uniprot.org/uniprot/Q16921 Q16921]
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** [http://www.uniprot.org/uniprot/Q9XBJ1 Q9XBJ1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: common name=Pyruvate carboxylase}}
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{{#set: ec number=EC-6.4.1.1}}
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{{#set: gene associated=Tiso_gene_15144|Tiso_gene_2812|Tiso_gene_15145}}
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{{#set: in pathway=PWY-6142|PWY-6146|PWY-5750|P42-PWY|PWY66-399}}
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation|manual-primary_network|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 19:02, 18 March 2018

Reaction PYRUVATE-CARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
    • Pyruvate carboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hydrogencarbonate[c] + 1 pyruvate[c] + 1 ATP[c] => 1 H+[c] + 1 phosphate[c] + 1 oxaloacetate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
    • 8 reactions found over 14 reactions in the full pathway
  • PWY-6146, Methanobacterium thermoautotrophicum biosynthetic metabolism: PWY-6146
    • 7 reactions found over 16 reactions in the full pathway
  • PWY-5750, itaconate biosynthesis: PWY-5750
    • 3 reactions found over 4 reactions in the full pathway
  • P42-PWY, incomplete reductive TCA cycle: P42-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY66-399, gluconeogenesis III: PWY66-399
    • 10 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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