Difference between revisions of "PYRUVATE-CARBOXYLASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-I-RXN GTP-CYCLOHYDRO-I-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5506 PWY-5506] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-I-RXN GTP-CYCLOHYDRO-I-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** methanol oxidation to formaldehyde IV
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** [http://enzyme.expasy.org/EC/3.5.4.16 EC-3.5.4.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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  '''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[CATAL-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[DIHYDRONEOPTERIN-P3]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* [http://metacyc.org/META/NEW-IMAGE?object=METHANOL-OXIDASE-RXN METHANOL-OXIDASE-RXN]
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** 1 H2O[c] '''+''' 1 GTP[c] '''=>''' 1 H+[c] '''+''' 1 formate[c] '''+''' 1 7,8-dihydroneopterin 3'-triphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_12736]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways ==
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* [[PWY-5663]], tetrahydrobiopterin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5663 PWY-5663]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6983]], tetrahydrobiopterin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6983 PWY-6983]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY0-1433]], tetrahydromonapterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1433 PWY0-1433]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7442 PWY-7442]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5664]], tetrahydrobiopterin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5664 PWY-5664]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6703]], preQ0 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6703 PWY-6703]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* RHEA:
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{{#set: common name=methanol oxidation to formaldehyde IV}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17473 17473]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: reaction not found=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00424 R00424]
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{{#set: completion rate=50.0}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P19465 P19465]
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** [http://www.uniprot.org/uniprot/P22288 P22288]
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** [http://www.uniprot.org/uniprot/P43866 P43866]
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** [http://www.uniprot.org/uniprot/P51594 P51594]
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** [http://www.uniprot.org/uniprot/P64207 P64207]
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** [http://www.uniprot.org/uniprot/Q9CGE3 Q9CGE3]
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** [http://www.uniprot.org/uniprot/O66603 O66603]
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** [http://www.uniprot.org/uniprot/P56462 P56462]
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** [http://www.uniprot.org/uniprot/P0A6T5 P0A6T5]
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** [http://www.uniprot.org/uniprot/P50141 P50141]
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** [http://www.uniprot.org/uniprot/P30793 P30793]
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** [http://www.uniprot.org/uniprot/P51601 P51601]
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** [http://www.uniprot.org/uniprot/Q05915 Q05915]
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** [http://www.uniprot.org/uniprot/P51597 P51597]
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** [http://www.uniprot.org/uniprot/P51600 P51600]
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** [http://www.uniprot.org/uniprot/Q94465 Q94465]
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** [http://www.uniprot.org/uniprot/Q55759 Q55759]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.5.4.16}}
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{{#set: gene associated=Tiso_gene_12736}}
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{{#set: in pathway=PWY-5663|PWY-6983|PWY0-1433|PWY-7442|PWY-5664|PWY-6703|PWY-6147}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 19:02, 18 March 2018

Reaction GTP-CYCLOHYDRO-I-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 GTP[c] => 1 H+[c] + 1 formate[c] + 1 7,8-dihydroneopterin 3'-triphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5663, tetrahydrobiopterin biosynthesis I: PWY-5663
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6983, tetrahydrobiopterin biosynthesis III: PWY-6983
    • 1 reactions found over 3 reactions in the full pathway
  • PWY0-1433, tetrahydromonapterin biosynthesis: PWY0-1433
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7442, drosopterin and aurodrosopterin biosynthesis: PWY-7442
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-5664, tetrahydrobiopterin biosynthesis II: PWY-5664
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6703, preQ0 biosynthesis: PWY-6703
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: PWY-6147
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links




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