Difference between revisions of "PWY-5947"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SUC SUC] == * smiles: ** C(C([O-])=O)CC([O-])=O * inchi key: ** InChIKey=KDYFGRWQOYBRFD-UHFFFAO...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9724 RXN-9724] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SUC SUC] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9724 RXN-9724] ==
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* smiles:
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* direction:
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** C(C([O-])=O)CC([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=KDYFGRWQOYBRFD-UHFFFAOYSA-L
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** [http://enzyme.expasy.org/EC/1.3.1.77 EC-1.3.1.77]
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* common name:
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** succinate
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* molecular weight:
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** 116.073   
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* Synonym(s):
 
* Synonym(s):
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** succinic acid
 
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** suc
 
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** succ
 
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** butanedioic acid
 
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** ethylenesuccinic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 2 [[NADPH]][c] '''+''' 1 [[PELARGONIDIN-CMPD]][c] '''+''' 3 [[PROTON]][c] '''=>''' 2 [[NADP]][c] '''+''' 1 [[CPD-10413]][c]
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* [[RXN1F-165]]
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* With common name(s):
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* [[RXN0-299]]
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** 2 NADPH[c] '''+''' 1 pelargonidin[c] '''+''' 3 H+[c] '''=>''' 2 NADP+[c] '''+''' 1 (-)-epiafzelechin[c]
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* [[SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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* [[RXN-7648]]
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== Genes associated with this reaction  ==
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* [[SUCHMSSELCYSL]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[SUCCSEMIALDDEHYDROG-RXN]]
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* [[Tiso_gene_15272]]
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* [[RXN-527]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-113]]
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* [[Tiso_gene_9504]]
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* [[RXN490-3641]]
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** [[pantograph]]-[[esiliculosus]]
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* [[RXN-115]]
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== Pathways  ==
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* [[SUCHMSSELCYSLh]]
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* [[PWY-6035]], 2,3-cis-flavanols biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6035 PWY-6035]
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* [[RXN-171]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[RXN-8450]]
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== Reconstruction information  ==
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* [[RXN1F-168]]
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* Category: [[orthology]]
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* [[NARINGENIN-3-DIOXYGENASE-RXN]]
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** Source: [[orthology-esiliculosus]]
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* [[SSNOm]]
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*** Tool: [[pantograph]]
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* [[1.14.11.2-RXN]]
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* [[RXN-7785]]
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* [[LEUCPEL-RXN]]
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* [[RXN66-470]]
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* [[RXN-7922]]
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* [[1.14.11.19-RXN]]
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* [[RXN-602]]
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* [[RXN1F-167]]
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* [[METBALT-RXN]]
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* [[PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN]]
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* [[RXN1F-93]]
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* [[RXN-9929]]
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* [[RXN1F-169]]
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* [[RXN-6550]]
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* [[1.14.11.18-RXN]]
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* [[RXN-7775]]
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* [[RXN1F-162]]
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* [[RXN1F-163]]
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== Reaction(s) of unknown directionality ==
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* [[3-OXOACID-COA-TRANSFERASE-RXN]]
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* [[FUMARATE-REDUCTASE-NADH-RXN]]
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* [[SUCL_gdp_m]]
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* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
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* [[O-SUCCHOMOSERLYASE-RXN]]
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* [[RXN-9384]]
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* [[RXNI-2]]
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* [[ISOCIT-CLEAV-RXN]]
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* [[SUCCCOASYN-RXN]]
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== External links  ==
 
== External links  ==
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* CAS : 110-15-6
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* LIGAND-RXN:
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* METABOLIGHTS : MTBLC30031
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** [http://www.genome.jp/dbget-bin/www_bget?R06541 R06541]
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=160419 160419]
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{{#set: ec number=EC-1.3.1.77}}
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* KNAPSACK : C00001205
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{{#set: gene associated=Tiso_gene_15272|Tiso_gene_9504}}
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* HMDB : HMDB00254
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{{#set: in pathway=PWY-6035}}
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* LIGAND-CPD:
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{{#set: reconstruction category=orthology}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00042 C00042]
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{{#set: reconstruction source=orthology-esiliculosus}}
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* CHEMSPIDER:
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{{#set: reconstruction tool=pantograph}}
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** [http://www.chemspider.com/Chemical-Structure.140973.html 140973]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=30031 30031]
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* BIGG : succ
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{{#set: smiles=C(C([O-])=O)CC([O-])=O}}
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{{#set: inchi key=InChIKey=KDYFGRWQOYBRFD-UHFFFAOYSA-L}}
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{{#set: common name=succinate}}
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{{#set: molecular weight=116.073    }}
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{{#set: common name=succinic acid|suc|succ|butanedioic acid|ethylenesuccinic acid}}
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{{#set: consumed by=SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN}}
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{{#set: produced by=RXN1F-165|RXN0-299|SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN|RXN-7648|SUCHMSSELCYSL|SUCCSEMIALDDEHYDROG-RXN|RXN-527|RXN-113|RXN490-3641|RXN-115|SUCHMSSELCYSLh|RXN-171|RXN-8450|RXN1F-168|NARINGENIN-3-DIOXYGENASE-RXN|SSNOm|1.14.11.2-RXN|RXN-7785|LEUCPEL-RXN|RXN66-470|RXN-7922|1.14.11.19-RXN|RXN-602|RXN1F-167|METBALT-RXN|PEPTIDE-ASPARTATE-BETA-DIOXYGENASE-RXN|RXN1F-93|RXN-9929|RXN1F-169|RXN-6550|1.14.11.18-RXN|RXN-7775|RXN1F-162|RXN1F-163}}
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{{#set: consumed or produced by=3-OXOACID-COA-TRANSFERASE-RXN|FUMARATE-REDUCTASE-NADH-RXN|SUCL_gdp_m|SUCCINATE--COA-LIGASE-GDP-FORMING-RXN|O-SUCCHOMOSERLYASE-RXN|RXN-9384|RXNI-2|ISOCIT-CLEAV-RXN|SUCCCOASYN-RXN}}
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Revision as of 19:03, 18 March 2018

Reaction RXN-9724

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6035, 2,3-cis-flavanols biosynthesis: PWY-6035
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-5947&oldid=21570"