Difference between revisions of "Tiso gene 5013"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=DARABCATK12-PWY DARABCATK12-PWY] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863] ==
 
* taxonomic range:
 
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** D-arabinose degradation I
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** pyruvate fermentation to hexanol (engineered)
 
* Synonym(s):
 
* Synonym(s):
** D-arabinose catabolism
 
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''1''' reactions found over '''4''' reactions in the full pathway
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  '''5''' reactions found over '''11''' reactions in the full pathway
* [[GLYCOLALD-DEHYDROG-RXN]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_16181]]
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*** [[Tiso_gene_15327]]
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*** [[Tiso_gene_17451]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-athaliana]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-synechocystis]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11662]]
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** 7 associated gene(s):
 +
*** [[Tiso_gene_5857]]
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*** [[Tiso_gene_16703]]
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*** [[Tiso_gene_14027]]
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*** [[Tiso_gene_14262]]
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*** [[Tiso_gene_14026]]
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*** [[Tiso_gene_18838]]
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*** [[Tiso_gene_18839]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[annotation-in-silico_annotation]]
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*** [[orthology-creinhardtii]]
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*** [[orthology-esiliculosus]]
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* [[RXN-11667]]
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** 1 associated gene(s):
 +
*** [[Tiso_gene_5857]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-athaliana]]
 +
* [[RXN-12565]]
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** 6 associated gene(s):
 +
*** [[Tiso_gene_10116]]
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*** [[Tiso_gene_3856]]
 +
*** [[Tiso_gene_15327]]
 +
*** [[Tiso_gene_3855]]
 +
*** [[Tiso_gene_17451]]
 +
*** [[Tiso_gene_16181]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-12570]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_14026]]
 +
*** [[Tiso_gene_14027]]
 +
*** [[Tiso_gene_5857]]
 +
*** [[Tiso_gene_14262]]
 +
*** [[Tiso_gene_18838]]
 +
*** [[Tiso_gene_18839]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-experimental_annotation]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
* [http://metacyc.org/META/NEW-IMAGE?object=DARABALDOL-RXN DARABALDOL-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=HEXANOL-RXN HEXANOL-RXN]
* [http://metacyc.org/META/NEW-IMAGE?object=DARABISOM-RXN DARABISOM-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRUFLAVREDUCT-RXN PYRUFLAVREDUCT-RXN]
* [http://metacyc.org/META/NEW-IMAGE?object=DARABKIN-RXN DARABKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12558 RXN-12558]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12559 RXN-12559]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12568 RXN-12568]
 
== External links  ==
 
== External links  ==
* ECOCYC:
+
{{#set: taxonomic range=TAX-2759}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=DARABCATK12-PWY DARABCATK12-PWY]
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{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
{{#set: common name=D-arabinose degradation I}}
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{{#set: common name=pyruvate fermentation to hexanol (engineered)}}
{{#set: common name=D-arabinose catabolism}}
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{{#set: reaction found=5}}
{{#set: reaction found=1}}
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{{#set: total reaction=11}}
{{#set: reaction not found=4}}
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{{#set: completion rate=45.0}}
{{#set: completion rate=25.0}}
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Revision as of 19:04, 18 March 2018

Pathway PWY-6863

  • taxonomic range:
  • common name:
    • pyruvate fermentation to hexanol (engineered)
  • Synonym(s):

Reaction(s) found

5 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links