Difference between revisions of "PWY-6537"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** retinyl-palmitate esterase
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** glycine betaine biosynthesis III (plants)
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** ORF
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** serine_esterase
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** sialate_o-acetylesterase-like_protein
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** lysophospholipase
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** alpha_beta_hydrolase
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** alpha_beta_hydrolase_fold_protein
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** protein_chloroplastic
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** para-nitrobenzyl_esterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
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* Synonym(s):
 
* Synonym(s):
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** retinyl palmitate hydrolase
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** glycine betaine biosynthesis
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** retinyl palmitate hydrolyase
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** retinyl ester hydrolase
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[CHOCOLA_A]][c] '''=>''' 1 [[Retinols]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
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* [[BADH-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 H2O[c] '''+''' 1 all-trans-retinyl palmitate[c] '''=>''' 1 a retinol[c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
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*** [[Tiso_gene_3513]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-6268]]
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* [[Tiso_gene_2556]]
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** 0 associated gene:
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** IN-SILICO_ANNOTATION
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** 1 reconstruction source(s) associated:
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***EC-NUMBER
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_12686]]
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== Reaction(s) not found ==
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-357 RXN1F-357]
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***EC-NUMBER
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* [[Tiso_gene_1537]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_1922]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_4650]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_17029]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_10066]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_9429]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_16518]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_11351]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_4606]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_19778]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_1538]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21508 21508]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY1F-353 PWY1F-353]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: common name=retinyl-palmitate esterase}}
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{{#set: common name=glycine betaine biosynthesis III (plants)}}
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{{#set: common name=ORF}}
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{{#set: common name=glycine betaine biosynthesis}}
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{{#set: common name=serine_esterase}}
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{{#set: reaction found=2}}
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{{#set: common name=sialate_o-acetylesterase-like_protein}}
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{{#set: total reaction=3}}
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{{#set: common name=lysophospholipase}}
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{{#set: completion rate=67.0}}
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{{#set: common name=alpha_beta_hydrolase}}
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{{#set: common name=alpha_beta_hydrolase_fold_protein}}
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{{#set: common name=protein_chloroplastic}}
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{{#set: common name=para-nitrobenzyl_esterase}}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: common name=retinyl palmitate hydrolase|retinyl palmitate hydrolyase|retinyl ester hydrolase}}
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{{#set: gene associated=Tiso_gene_2556|Tiso_gene_12686|Tiso_gene_1537|Tiso_gene_1922|Tiso_gene_4650|Tiso_gene_17029|Tiso_gene_10066|Tiso_gene_9429|Tiso_gene_16518|Tiso_gene_11351|Tiso_gene_4606|Tiso_gene_19778|Tiso_gene_1538}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 18:05, 18 March 2018

Pathway PWY1F-353

  • taxonomic range:
  • common name:
    • glycine betaine biosynthesis III (plants)
  • Synonym(s):
    • glycine betaine biosynthesis

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6537&oldid=21903"