Difference between revisions of "RXN1G-508"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-168 RXN1F-168] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
Line 1: Line 1:
[[Category:Pathway]]
+
[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-168 RXN1F-168] ==
* taxonomic range:
+
* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
** LEFT-TO-RIGHT
* common name:
+
* ec number:
** gibberellin biosynthesis IV (Gibberella fujikuroi)
+
** [http://enzyme.expasy.org/EC/1.14.11.12 EC-1.14.11.12]
 
* Synonym(s):
 
* Synonym(s):
** GA3 biosynthesis
 
  
== Reaction(s) found ==
+
== Reaction Formula ==
'''6''' reactions found over '''15''' reactions in the full pathway
+
* With identifiers:
* [[1.14.13.78-RXN]]
+
** 1 [[CPD-10332]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD1F-96]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[WATER]][c]
* [[1.14.13.79-RXN]]
+
* With common name(s):
* [[RXN-5242]]
+
** 1 gibberellin44 (open lactone form)[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 gibberellin A19[c] '''+''' 1 succinate[c] '''+''' 1 H2O[c]
* [[RXN-7580]]
+
 
* [[RXN1F-160]]
+
== Genes associated with this reaction  ==
* [[RXN1F-161]]
+
Genes have been associated with this reaction based on different elements listed below.
== Reaction(s) not found ==
+
* [[Tiso_gene_3330]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6545 RXN-6545]
+
** [[pantograph]]-[[athaliana]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6549 RXN-6549]
+
== Pathways  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7617 RXN-7617]
+
* [[PWY-5035]], gibberellin biosynthesis III (early C-13 hydroxylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5035 PWY-5035]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7619 RXN-7619]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7621 RXN-7621]
+
== Reconstruction information  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7624 RXN-7624]
+
* Category: [[orthology]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7625 RXN-7625]
+
** Source: [[orthology-athaliana]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7634 RXN-7634]
+
*** Tool: [[pantograph]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-166 RXN1F-166]
+
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-4751}}
+
* RHEA:
{{#set: common name=gibberellin biosynthesis IV (Gibberella fujikuroi)}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16033 16033]
{{#set: common name=GA3 biosynthesis}}
+
* LIGAND-RXN:
{{#set: reaction found=6}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07184 R07184]
{{#set: reaction not found=15}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: completion rate=40.0}}
+
{{#set: ec number=EC-1.14.11.12}}
 +
{{#set: gene associated=Tiso_gene_3330}}
 +
{{#set: in pathway=PWY-5035}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 19:06, 18 March 2018

Reaction RXN1F-168

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5035, gibberellin biosynthesis III (early C-13 hydroxylation): PWY-5035
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links