Difference between revisions of "Tiso gene 15711"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] == * direction: ** REVERSIBLE * common name: ** geranylgeranyl_diphosphate_reduc...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5057 PWY-5057] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7660 RXN-7660] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* common name:
 
* common name:
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** L-valine degradation II
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** geranylgeranyl_diphosphate_reductase
 
* Synonym(s):
 
* Synonym(s):
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** Ehrlich pathway
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[BRANCHED-CHAINAMINOTRANSFERVAL-RXN]]
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** 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[CPD-7003]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-7657]]
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* With common name(s):
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== Reaction(s) not found ==
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** 1 phytyl diphosphate[c] '''+''' 1 NADP+[c] '''<=>''' 1 NADPH[c] '''+''' 1 tetrahydrogeranylgeranyl diphosphate[c] '''+''' 1 H+[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7643 RXN-7643]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_2613]]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5063]], phytyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5063 PWY-5063]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08756 R08756]
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{{#set: common name=L-valine degradation II}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Ehrlich pathway}}
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{{#set: common name=geranylgeranyl_diphosphate_reductase}}
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{{#set: reaction found=2}}
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{{#set: gene associated=Tiso_gene_2613}}
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{{#set: reaction not found=3}}
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{{#set: in pathway=PWY-5063}}
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{{#set: completion rate=67.0}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 19:06, 18 March 2018

Reaction RXN-7660

  • direction:
    • REVERSIBLE
  • common name:
    • geranylgeranyl_diphosphate_reductase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 phytyl diphosphate[c] + 1 NADP+[c] <=> 1 NADPH[c] + 1 tetrahydrogeranylgeranyl diphosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

  • Tiso_gene_2613
    • IN-SILICO_ANNOTATION
      • AUTOMATED-NAME-MATCH
    • EXPERIMENTAL_ANNOTATION
      • AUTOMATED-NAME-MATCH

Pathways

  • PWY-5063, phytyl diphosphate biosynthesis: PWY-5063
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15711&oldid=21985"