Difference between revisions of "IPPISOM-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_2283 == * left end position: ** 4493 * transcription direction: ** POSITIVE * right end position: ** 4749 * centisome position: ** 22.57108...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8999 RXN-8999] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Tiso_gene_2283 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8999 RXN-8999] ==
* left end position:
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* direction:
** 4493
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/2.5.1.31 EC-2.5.1.31]
* right end position:
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** 4749
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* centisome position:
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** 22.571083   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[ACSERLY-RXN]]
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* With identifiers:
** in-silico_annotation
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** 8 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 8 [[PPI]][c] '''+''' 1 [[UNDECAPRENYL-DIPHOSPHATE]][c]
***ec-number
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* With common name(s):
* [[RXN-12726]]
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** 8 isopentenyl diphosphate[c] '''+''' 1 (2E,6E)-farnesyl diphosphate[c] '''=>''' 8 diphosphate[c] '''+''' 1 di-trans,octa-cis-undecaprenyl diphosphate[c]
** in-silico_annotation
+
 
***ec-number
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== Genes associated with this reaction  ==
* [[SULFOCYS-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
** in-silico_annotation
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* [[Tiso_gene_8531]]
***ec-number
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** [[pantograph]]-[[athaliana]]
== Pathways associated ==
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** [[pantograph]]-[[synechocystis]]
* [[CYSTSYN-PWY]]
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** [[pantograph]]-[[esiliculosus]]
* [[PWY-6936]]
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== Pathways  ==
 +
* [[PWY-5785]], di-trans,poly-cis-undecaprenyl phosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5785 PWY-5785]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=4493}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27551 27551]
{{#set: right end position=4749}}
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* LIGAND-RXN:
{{#set: centisome position=22.571083    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R06447 R06447]
{{#set: reaction associated=ACSERLY-RXN|RXN-12726|SULFOCYS-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07269 R07269]
{{#set: pathway associated=CYSTSYN-PWY|PWY-6936}}
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* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O82827 O82827]
 +
** [http://www.uniprot.org/uniprot/O43091 O43091]
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** [http://www.uniprot.org/uniprot/Q9JX35 Q9JX35]
 +
** [http://www.uniprot.org/uniprot/O67291 O67291]
 +
** [http://www.uniprot.org/uniprot/Q9X1B8 Q9X1B8]
 +
** [http://www.uniprot.org/uniprot/O34559 O34559]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-2.5.1.31}}
 +
{{#set: gene associated=Tiso_gene_8531}}
 +
{{#set: in pathway=PWY-5785}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-synechocystis|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 19:06, 18 March 2018

Reaction RXN-8999

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5785, di-trans,poly-cis-undecaprenyl phosphate biosynthesis: PWY-5785
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links