Difference between revisions of "Tiso gene 4493"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7978 RXN-7978] == * direction: ** LEFT-TO-RIGHT * common name: ** zeaxanthin_epoxidase * Synony...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5940 PWY-5940] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7978 RXN-7978] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5940 PWY-5940] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
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** zeaxanthin_epoxidase
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** streptomycin biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** Zea-epoxidase
 
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''18''' reactions in the full pathway
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** 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD1F-130]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[CPD1F-131]][c] '''+''' 1 [[WATER]][c]
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* [[MYO-INOSITOL-2-DEHYDROGENASE-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''+''' 1 oxygen[c] '''+''' 1 zeaxanthin[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 antheraxanthin[c] '''+''' 1 H2O[c]
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*** [[Tiso_gene_17306]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PHOSPHOGLUCMUT-RXN]]
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* [[Tiso_gene_6386]]
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** 2 associated gene(s):
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** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_13477]]
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_4816]]
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** EXPERIMENTAL_ANNOTATION
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** 3 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_10919]]
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*** [[manual-primary_network]]
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** EXPERIMENTAL_ANNOTATION
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*** [[annotation-experimental_annotation]]
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***AUTOMATED-NAME-MATCH
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== Reaction(s) not found ==
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.4.2-RXN 2.1.4.2-RXN]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.4.2.27-RXN 2.4.2.27-RXN]
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* [[PWY-5945]], zeaxanthin, antheraxanthin and violaxanthin interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5945 PWY-5945]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.50-RXN 2.6.1.50-RXN]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.56-RXN 2.6.1.56-RXN]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.33-RXN 2.7.7.33-RXN]
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* [[orthology]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=3.1.3.40-RXN 3.1.3.40-RXN]
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** [[pantograph]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11097 RXN-11097]
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*** [[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11098 RXN-11098]
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* [[annotation]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11099 RXN-11099]
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** [[pathwaytools]]:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9467 RXN-9467]
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*** [[experimental_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9469 RXN-9469]
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*** [[in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9470 RXN-9470]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9471 RXN-9471]
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* [http://metacyc.org/META/NEW-IMAGE?object=SCYLLO-INOSAMINE-KINASE-RXN SCYLLO-INOSAMINE-KINASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=STREPTOMYCIN-6-KINASE-RXN STREPTOMYCIN-6-KINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=STREPTOMYCIN-6-PHOSPHATASE-RXN STREPTOMYCIN-6-PHOSPHATASE-RXN]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* LIGAND-MAP:
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** [http://www.genome.jp/dbget-bin/www_bget?R07199 R07199]
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** [http://www.genome.jp/dbget-bin/www_bget?map00521 map00521]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-201174}}
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{{#set: common name=zeaxanthin_epoxidase}}
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{{#set: common name=streptomycin biosynthesis}}
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{{#set: common name=Zea-epoxidase}}
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{{#set: reaction found=2}}
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{{#set: gene associated=Tiso_gene_6386|Tiso_gene_10919}}
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{{#set: total reaction=18}}
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{{#set: in pathway=PWY-5945}}
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{{#set: completion rate=11.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Revision as of 19:07, 18 March 2018

Pathway PWY-5940

  • taxonomic range:
  • common name:
    • streptomycin biosynthesis
  • Synonym(s):

Reaction(s) found

2 reactions found over 18 reactions in the full pathway

Reaction(s) not found

External links



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