Difference between revisions of "NARINGENIN-CMPD"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THMPPPT THMPPPT] == * direction: ** LEFT-TO-RIGHT * common name: ** ATP:thiamine-diphosphate phosph...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THMPPPT THMPPPT] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEPHOSPHORYLATION-RXN AMP-DEPHOSPHORYLATION-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ATP:thiamine-diphosphate phosphotransferase
+
** 5_-nucleotidase
 +
** 5_deoxy_cytosolic_type_c_protein
 +
** probable_cytosolic_imp-gmp_specific_5_-nucleotidase
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[THIAMINE-PYROPHOSPHATE]][c] '''+''' 1.0 [[ATP]][c] '''=>''' 1.0 [[CPD-611]][c] '''+''' 1.0 [[ADP]][c]
+
** 1 [[AMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENOSINE]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 thiamine diphosphate[c] '''+''' 1.0 ATP[c] '''=>''' 1.0 thiamine triphosphate[c] '''+''' 1.0 ADP[c]
+
** 1 AMP[c] '''+''' 1 H2O[c] '''=>''' 1 adenosine[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16512]]
+
* [[Tiso_gene_6640]]
−
** [[pantograph]]-[[creinhardtii]]
+
** [[pantograph]]-[[esiliculosus]]
−
* [[Tiso_gene_1453]]
+
* [[Tiso_gene_6988]]
−
** [[pantograph]]-[[creinhardtii]]
+
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_14434]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_5911]]
 +
** IN-SILICO_ANNOTATION
 +
***AUTOMATED-NAME-MATCH
 +
* [[Tiso_gene_13929]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
** [[pantograph]]-[[esiliculosus]]
 +
* [[Tiso_gene_14435]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 +
* [[Tiso_gene_14246]]
 +
** IN-SILICO_ANNOTATION
 +
***EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[creinhardtii]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29375 29375]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00183 R00183]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P06196 P06196]
 +
** [http://www.uniprot.org/uniprot/P21588 P21588]
 +
** [http://www.uniprot.org/uniprot/O34313 O34313]
 +
** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44]
 +
** [http://www.uniprot.org/uniprot/O29385 O29385]
 +
** [http://www.uniprot.org/uniprot/P44569 P44569]
 +
** [http://www.uniprot.org/uniprot/O83142 O83142]
 +
** [http://www.uniprot.org/uniprot/P49902 P49902]
 +
** [http://www.uniprot.org/uniprot/P22848 P22848]
 +
** [http://www.uniprot.org/uniprot/Q05927 Q05927]
 +
** [http://www.uniprot.org/uniprot/P21589 P21589]
 +
** [http://www.uniprot.org/uniprot/P29240 P29240]
 +
** [http://www.uniprot.org/uniprot/P07024 P07024]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ATP:thiamine-diphosphate phosphotransferase}}
+
{{#set: common name=5_-nucleotidase}}
−
{{#set: gene associated=Tiso_gene_16512|Tiso_gene_1453}}
+
{{#set: common name=5_deoxy_cytosolic_type_c_protein}}
−
{{#set: in pathway=}}
+
{{#set: common name=probable_cytosolic_imp-gmp_specific_5_-nucleotidase}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=ORF}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: ec number=EC-3.1.3.5}}
−
{{#set: reconstruction source=creinhardtii}}
+
{{#set: gene associated=Tiso_gene_6640|Tiso_gene_6988|Tiso_gene_14434|Tiso_gene_5911|Tiso_gene_13929|Tiso_gene_14435|Tiso_gene_14246}}
 +
{{#set: in pathway=SALVADEHYPOX-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 18:08, 18 March 2018

Reaction AMP-DEPHOSPHORYLATION-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5_-nucleotidase
    • 5_deoxy_cytosolic_type_c_protein
    • probable_cytosolic_imp-gmp_specific_5_-nucleotidase
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 AMP[c] + 1 H2O[c] => 1 adenosine[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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