Difference between revisions of "PWY-6766"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXAL-4-DEHYDROGENASE-RXN PYRIDOXAL-4-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=XYLCAT-PWY XYLCAT-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXAL-4-DEHYDROGENASE-RXN PYRIDOXAL-4-DEHYDROGENASE-RXN] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
** xylose degradation I
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** aldo_keto_reductase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.107 EC-1.1.1.107]
 
* Synonym(s):
 
* Synonym(s):
** xylose catabolism
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
* [[XYLULOKIN-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[PYRIDOXAL]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-375]][c] '''+''' 1 [[PROTON]][c]
== Reaction(s) not found ==
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* With common name(s):
* [http://metacyc.org/META/NEW-IMAGE?object=XYLISOM-RXN XYLISOM-RXN]
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** 1 NAD+[c] '''+''' 1 pyridoxal[c] '''=>''' 1 NADH[c] '''+''' 1 4-pyridoxolactone[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[Tiso_gene_9885]]
 +
** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_13083]]
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** EXPERIMENTAL_ANNOTATION
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***AUTOMATED-NAME-MATCH
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* [[Tiso_gene_6340]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
 +
== Pathways  ==
 +
* [[PWY-5499]], vitamin B6 degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5499 PWY-5499]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* ECOCYC:
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* RHEA:
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=XYLCAT-PWY XYLCAT-PWY]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21339 21339]
{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01707 R01707]
{{#set: common name=xylose degradation I}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=xylose catabolism}}
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{{#set: common name=aldo_keto_reductase}}
{{#set: reaction found=1}}
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{{#set: ec number=EC-1.1.1.107}}
{{#set: reaction not found=2}}
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{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083|Tiso_gene_6340}}
{{#set: completion rate=50.0}}
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{{#set: in pathway=PWY-5499}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 18:09, 18 March 2018

Reaction PYRIDOXAL-4-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • aldo_keto_reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NAD+[c] + 1 pyridoxal[c] => 1 NADH[c] + 1 4-pyridoxolactone[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5499, vitamin B6 degradation: PWY-5499
    • 1 reactions found over 9 reactions in the full pathway

Reconstruction information

External links