Difference between revisions of "Tiso gene 10324"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoenol...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7112 PWY-7112] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7112 PWY-7112] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
 
* common name:
 
* common name:
−
** Phosphoenolpyruvate carboxykinase [ATP]
+
** 4-hydroxy-2-nonenal detoxification
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/4.1.1.49 EC-4.1.1.49]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''4''' reactions in the full pathway
−
** 1 [[ATP]][c] '''+''' 1 [[OXALACETIC_ACID]][c] '''=>''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* [[RXN-13673]]
−
* With common name(s):
+
** 11 associated gene(s):
−
** 1 ATP[c] '''+''' 1 oxaloacetate[c] '''=>''' 1 phosphoenolpyruvate[c] '''+''' 1 ADP[c] '''+''' 1 CO2[c]
+
*** [[Tiso_gene_5129]]
−
 
+
*** [[Tiso_gene_19041]]
−
== Genes associated with this reaction  ==
+
*** [[Tiso_gene_2775]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Tiso_gene_8389]]
−
* [[Tiso_gene_19475]]
+
*** [[Tiso_gene_3233]]
−
** EXPERIMENTAL_ANNOTATION
+
*** [[Tiso_gene_1104]]
−
***AUTOMATED-NAME-MATCH
+
*** [[Tiso_gene_6036]]
−
** [[pantograph]]-[[athaliana]]
+
*** [[Tiso_gene_19791]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_20110]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** [[Tiso_gene_8508]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** [[Tiso_gene_8509]]
−
== Pathways  ==
+
** 3 reconstruction source(s) associated:
−
* [[PWY-561]], superpathway of glyoxylate cycle and fatty acid degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561]
+
*** [[annotation-in-silico_annotation]]
−
** '''5''' reactions found over '''8''' reactions in the full pathway
+
*** [[annotation-experimental_annotation]]
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
+
*** [[orthology-esiliculosus]]
−
** '''7''' reactions found over '''10''' reactions in the full pathway
+
* [[RXN-13677]]
−
* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
+
** 2 associated gene(s):
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
*** [[Tiso_gene_16906]]
−
== Reconstruction information  ==
+
*** [[Tiso_gene_860]]
−
* [[orthology]]:
+
** 2 reconstruction source(s) associated:
−
** [[pantograph]]:
+
*** [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** [[orthology-esiliculosus]]
−
*** [[athaliana]]
+
== Reaction(s) not found ==
−
*** [[esiliculosus]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13675 RXN-13675]
−
* [[manual]]:
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13678 RXN-13678]
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-33154}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18617 18617]
+
{{#set: common name=4-hydroxy-2-nonenal detoxification}}
−
* LIGAND-RXN:
+
{{#set: reaction found=2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00341 R00341]
+
{{#set: total reaction=4}}
−
* UNIPROT:
+
{{#set: completion rate=50.0}}
−
** [http://www.uniprot.org/uniprot/P10963 P10963]
+
−
** [http://www.uniprot.org/uniprot/Q9PP01 Q9PP01]
+
−
** [http://www.uniprot.org/uniprot/P43923 P43923]
+
−
** [http://www.uniprot.org/uniprot/P22259 P22259]
+
−
** [http://www.uniprot.org/uniprot/P42066 P42066]
+
−
** [http://www.uniprot.org/uniprot/P49292 P49292]
+
−
** [http://www.uniprot.org/uniprot/O49547 O49547]
+
−
** [http://www.uniprot.org/uniprot/Q9T074 Q9T074]
+
−
** [http://www.uniprot.org/uniprot/Q39294 Q39294]
+
−
** [http://www.uniprot.org/uniprot/Q9RC49 Q9RC49]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Phosphoenolpyruvate carboxykinase [ATP]}}
+
−
{{#set: ec number=EC-4.1.1.49}}
+
−
{{#set: gene associated=Tiso_gene_19475}}
+
−
{{#set: in pathway=PWY-561|PWY-7117|GLUCONEO-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|athaliana|esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation}}
+

Revision as of 18:09, 18 March 2018

Pathway PWY-7112

  • taxonomic range:
  • common name:
    • 4-hydroxy-2-nonenal detoxification
  • Synonym(s):

Reaction(s) found

2 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10324&oldid=22352"