Difference between revisions of "RXN-14503"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2001 RXN-2001] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
(Created page with "Category:Gene == Gene Tiso_gene_12989 == * left end position: ** 18 * transcription direction: ** POSITIVE * right end position: ** 4670 * centisome position: ** 0.1716083...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2001 RXN-2001] ==
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== Gene Tiso_gene_12989 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 18
* ec number:
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* transcription direction:
** [http://enzyme.expasy.org/EC/6.2.1 EC-6.2.1]
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** POSITIVE
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* right end position:
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** 4670
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* centisome position:
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** 0.17160834   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[3.1.3.16-RXN]]
** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-674]][c] '''=>''' 1 [[CINNAMOYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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** in-silico_annotation
* With common name(s):
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***ec-number
** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 trans-cinnamate[c] '''=>''' 1 (E)-cinnamoyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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== Pathways associated ==
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_12275]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14183]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways ==
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* [[PWY-6457]], trans-cinnamoyl-CoA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6457 PWY-6457]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: left end position=18}}
** [http://www.genome.jp/dbget-bin/www_bget?R02255 R02255]
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{{#set: transcription direction=POSITIVE}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=4670}}
{{#set: ec number=EC-6.2.1}}
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{{#set: centisome position=0.17160834    }}
{{#set: gene associated=Tiso_gene_12275|Tiso_gene_14183}}
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{{#set: reaction associated=3.1.3.16-RXN}}
{{#set: in pathway=PWY-6457}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus|athaliana}}
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Revision as of 18:12, 18 March 2018

Gene Tiso_gene_12989

  • left end position:
    • 18
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4670
  • centisome position:
    • 0.17160834
  • Synonym(s):

Reactions associated

Pathways associated

External links