Difference between revisions of "PWY-6153"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_140 == * left end position: ** 6536 * transcription direction: ** NEGATIVE * right end position: ** 8330 * centisome position: ** 16.109632...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TA...")
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Pathway]]
−
== Gene Tiso_gene_140 ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] ==
−
* left end position:
+
* taxonomic range:
−
** 6536
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
−
* transcription direction:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
−
** NEGATIVE
+
* common name:
−
* right end position:
+
** sucrose biosynthesis I (from photosynthesis)
−
** 8330
+
−
* centisome position:
+
−
** 16.109632   
+
 
* Synonym(s):
 
* Synonym(s):
 +
** sucrose biosynthesis I (from Calvin cycle intermediates)
 +
** sucrose biosynthesis I
  
−
== Reactions associated ==
+
== Reaction(s) found ==
−
* [[QUINOPRIBOTRANS-RXN]]
+
'''7''' reactions found over '''9''' reactions in the full pathway
−
** in-silico_annotation
+
* [[F16ALDOLASE-RXN]]
−
***automated-name-match
+
** 6 associated gene(s):
−
== Pathways associated ==
+
*** [[Tiso_gene_65]]
−
* [[PWY-5316]]
+
*** [[Tiso_gene_9119]]
−
* [[PWY-5653]]
+
*** [[Tiso_gene_9179]]
−
* [[PYRIDNUCSYN-PWY]]
+
*** [[Tiso_gene_12272]]
−
* [[PWY-7342]]
+
*** [[Tiso_gene_14568]]
 +
*** [[Tiso_gene_9118]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[F16BDEPHOS-RXN]]
 +
** 7 associated gene(s):
 +
*** [[Tiso_gene_16502]]
 +
*** [[Tiso_gene_8226]]
 +
*** [[Tiso_gene_9435]]
 +
*** [[Tiso_gene_4904]]
 +
*** [[Tiso_gene_3483]]
 +
*** [[Tiso_gene_15398]]
 +
*** [[Tiso_gene_4905]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[GAPOXNPHOSPHN-RXN]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_20000]]
 +
*** [[Tiso_gene_6766]]
 +
*** [[Tiso_gene_10646]]
 +
*** [[Tiso_gene_3344]]
 +
*** [[Tiso_gene_235]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PGLUCISOM-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_19480]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PHOSGLYPHOS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_3527]]
 +
*** [[Tiso_gene_18263]]
 +
*** [[Tiso_gene_12104]]
 +
*** [[Tiso_gene_3526]]
 +
*** [[Tiso_gene_14642]]
 +
*** [[Tiso_gene_18264]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[PWY-7343]]
 +
** 0 associated gene:
 +
* [[SUCROSE-PHOSPHATE-SYNTHASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_14247]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=SUCROSE-PHOSPHATASE-RXN SUCROSE-PHOSPHATASE-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=6536}}
+
* PLANTCYC : SUCSYN-PWY
−
{{#set: transcription direction=NEGATIVE}}
+
* METACYC:
−
{{#set: right end position=8330}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=SUCSYN-PWY SUCSYN-PWY]
−
{{#set: centisome position=16.109632    }}
+
* ARACYC:
−
{{#set: reaction associated=QUINOPRIBOTRANS-RXN}}
+
** [http://metacyc.org/ARA/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY]
−
{{#set: pathway associated=PWY-5316|PWY-5653|PYRIDNUCSYN-PWY|PWY-7342}}
+
{{#set: taxonomic range=TAX-1117}}
 +
{{#set: taxonomic range=TAX-33090}}
 +
{{#set: common name=sucrose biosynthesis I (from photosynthesis)}}
 +
{{#set: common name=sucrose biosynthesis I (from Calvin cycle intermediates)|sucrose biosynthesis I}}
 +
{{#set: reaction found=7}}
 +
{{#set: total reaction=9}}
 +
{{#set: completion rate=78.0}}

Revision as of 19:15, 18 March 2018

Pathway SUCSYN-PWY

  • taxonomic range:
  • common name:
    • sucrose biosynthesis I (from photosynthesis)
  • Synonym(s):
    • sucrose biosynthesis I (from Calvin cycle intermediates)
    • sucrose biosynthesis I

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6153&oldid=22980"