Difference between revisions of "Resolution-of-Recombinational-Junction"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=T...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-CYCLODEAMINASE-RXN ORNITHINE-CYCLODEAMINASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** ornithine_cyclodeaminase
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** NAD salvage pathway I
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* ec number:
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** [http://enzyme.expasy.org/EC/4.3.1.12 EC-4.3.1.12]
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* Synonym(s):
 
* Synonym(s):
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** pyridine nucleotide cycling
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** PNC VI pathway
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** nicotinamide adenine dinucleotide salvage
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''6''' reactions in the full pathway
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** 1 [[L-ORNITHINE]][c] '''=>''' 1 [[PRO]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[NICONUCADENYLYLTRAN-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 L-ornithine[c] '''=>''' 1 L-proline[c] '''+''' 1 ammonium[c]
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*** [[Tiso_gene_6231]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* [[Tiso_gene_1843]]
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* [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN]
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** IN-SILICO_ANNOTATION
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* [http://metacyc.org/META/NEW-IMAGE?object=NADPYROPHOSPHAT-RXN NADPYROPHOSPHAT-RXN]
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***AUTOMATED-NAME-MATCH
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* [http://metacyc.org/META/NEW-IMAGE?object=NICOTINAMID-RXN NICOTINAMID-RXN]
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** [[pantograph]]-[[esiliculosus]]
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* [http://metacyc.org/META/NEW-IMAGE?object=NICOTINATEPRIBOSYLTRANS-RXN NICOTINATEPRIBOSYLTRANS-RXN]
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* [[Tiso_gene_17134]]
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* [http://metacyc.org/META/NEW-IMAGE?object=NMNNUCLEOSID-RXN NMNNUCLEOSID-RXN]
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** IN-SILICO_ANNOTATION
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***AUTOMATED-NAME-MATCH
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[ORN-AMINOPENTANOATE-CAT-PWY]], L-ornithine degradation I (L-proline biosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=ORN-AMINOPENTANOATE-CAT-PWY ORN-AMINOPENTANOATE-CAT-PWY]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* ECOCYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24368 24368]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00671 R00671]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: common name=NAD salvage pathway I}}
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** [http://www.uniprot.org/uniprot/Q59701 Q59701]
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{{#set: common name=pyridine nucleotide cycling|PNC VI pathway|nicotinamide adenine dinucleotide salvage}}
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** [http://www.uniprot.org/uniprot/P09773 P09773]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P33728 P33728]
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{{#set: total reaction=6}}
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** [http://www.uniprot.org/uniprot/O68052 O68052]
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{{#set: completion rate=17.0}}
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** [http://www.uniprot.org/uniprot/Q9WWA2 Q9WWA2]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ornithine_cyclodeaminase}}
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{{#set: ec number=EC-4.3.1.12}}
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{{#set: gene associated=Tiso_gene_1843|Tiso_gene_17134}}
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{{#set: in pathway=ORN-AMINOPENTANOATE-CAT-PWY|ARG-GLU-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Revision as of 19:16, 18 March 2018

Pathway PYRIDNUCSAL-PWY

  • taxonomic range:
  • common name:
    • NAD salvage pathway I
  • Synonym(s):
    • pyridine nucleotide cycling
    • PNC VI pathway
    • nicotinamide adenine dinucleotide salvage

Reaction(s) found

1 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




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