Difference between revisions of "23S-rRNA-guanine-2445"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN] == * direction: ** REV...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HCO3 HCO3] == * smiles: ** C([O-])(=O)O * inchi key: ** InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M *...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN LONG-CHAIN-ACYL-COA-DEHYDROGENASE-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HCO3 HCO3] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** C([O-])(=O)O
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* inchi key:
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** InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M
 
* common name:
 
* common name:
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** acyl-coenzyme_a_oxidase
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** hydrogencarbonate
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** acyl-_dehydrogenase
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* molecular weight:
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** ORF
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** 61.017   
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** acyl-CoA_dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.8.8 EC-1.3.8.8]
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* Synonym(s):
 
* Synonym(s):
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** carbonate
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** CO3-2
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** CO32-
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** HCO3-
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** HCO3
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** bicarbonate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[CARBPSYN-RXN]]
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** 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Long-Chain-234-Saturated-acyl-CoAs]][c] '''<=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[Long-Chain-Trans-23-Dehydroacyl-CoA]][c]
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* [[RXN1G-4355]]
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* With common name(s):
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''+''' 1 a long-chain 2,3,4-saturated fatty acyl CoA[c] '''<=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 a long-chain trans-2,3-dehydroacyl-CoA[c]
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* [[RXN-16909]]
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* [[PCr]]
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== Genes associated with this reaction  ==
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* [[R524-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-13202]]
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* [[Tiso_gene_6475]]
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* [[RXN-12893]]
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** IN-SILICO_ANNOTATION
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* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
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***EC-NUMBER
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* [[BIOTIN-CARBOXYL-RXN]]
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* [[Tiso_gene_18566]]
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* [[RXN0-742]]
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** IN-SILICO_ANNOTATION
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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***EC-NUMBER
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== Reaction(s) known to produce the compound ==
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* [[Tiso_gene_5991]]
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* [[1.2.1.27-RXN]]
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** IN-SILICO_ANNOTATION
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* [[RXN-11213]]
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***EC-NUMBER
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== Reaction(s) of unknown directionality ==
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* [[Tiso_gene_16631]]
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* [[RXN0-5224]]
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** IN-SILICO_ANNOTATION
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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***EC-NUMBER
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* [[RXN-18032]]
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* [[Tiso_gene_883]]
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* [[RXN-18031]]
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** EXPERIMENTAL_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_17967]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* CAS : 71-52-3
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** [http://www.genome.jp/dbget-bin/www_bget?R00392 R00392]
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* CAS : 144-55-8
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* UNIPROT:
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* METABOLIGHTS : MTBLC17544
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** [http://www.uniprot.org/uniprot/P15650 P15650]
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q8IUN8 Q8IUN8]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=769 769]
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{{#set: direction=REVERSIBLE}}
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* HMDB : HMDB00595
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{{#set: common name=acyl-coenzyme_a_oxidase}}
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* LIGAND-CPD:
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{{#set: common name=acyl-_dehydrogenase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00288 C00288]
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{{#set: common name=ORF}}
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* CHEMSPIDER:
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{{#set: common name=acyl-CoA_dehydrogenase}}
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** [http://www.chemspider.com/Chemical-Structure.749.html 749]
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{{#set: ec number=EC-1.3.8.8}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_6475|Tiso_gene_18566|Tiso_gene_5991|Tiso_gene_16631|Tiso_gene_883|Tiso_gene_17967}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17544 17544]
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{{#set: in pathway=}}
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* BIGG : hco3
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{{#set: reconstruction category=annotation}}
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{{#set: smiles=C([O-])(=O)O}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: inchi key=InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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{{#set: common name=hydrogencarbonate}}
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{{#set: molecular weight=61.017    }}
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{{#set: common name=carbonate|CO3-2|CO32-|HCO3-|HCO3|bicarbonate}}
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{{#set: consumed by=CARBPSYN-RXN|RXN1G-4355|ACETYL-COA-CARBOXYLTRANSFER-RXN|RXN-16909|PCr|R524-RXN|RXN-13202|RXN-12893|METHYLCROTONYL-COA-CARBOXYLASE-RXN|BIOTIN-CARBOXYL-RXN|RXN0-742|PYRUVATE-CARBOXYLASE-RXN}}
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{{#set: produced by=1.2.1.27-RXN|RXN-11213}}
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{{#set: reversible reaction associated=RXN0-5224|PROPIONYL-COA-CARBOXY-RXN|RXN-18032|RXN-18031}}

Revision as of 19:17, 18 March 2018

Metabolite HCO3

  • smiles:
    • C([O-])(=O)O
  • inchi key:
    • InChIKey=BVKZGUZCCUSVTD-UHFFFAOYSA-M
  • common name:
    • hydrogencarbonate
  • molecular weight:
    • 61.017
  • Synonym(s):
    • carbonate
    • CO3-2
    • CO32-
    • HCO3-
    • HCO3
    • bicarbonate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 71-52-3
  • CAS : 144-55-8
  • METABOLIGHTS : MTBLC17544
  • PUBCHEM:
  • HMDB : HMDB00595
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : hco3
"C([O-])(=O)O" cannot be used as a page name in this wiki.




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